ToolTutorials
devteam/fastqc
Cut1
Filter1
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iuc/multiqc
upload1
Remove beginning1
bgruening/tp_cut_tool
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Grouping1
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iuc/fasta-stats
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devteam/fasta2tab
Summary_Statistics1
iuc/seqtk_subseq
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__MERGE_COLLECTION__
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Show beginning1
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rnateam/rbc_mafft
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iuc/filter_tabular
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devteam/gffread
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iuc/table_compute
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iuc/collection_element_identifiers
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devteam/freebayes
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iuc/snpEff_download
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bgruening/music_construct_eset
iuc/anndata_import
ebi-gxa/scanpy_filter_cells
devteam/bwa
tabular_to_csv
wc_gnu
peterjc/seq_filter_by_id
iuc/bcftools_norm
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CONVERTER_gz_to_uncompressed
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chemteam/md_converter
bgruening/openbabel_svg_depiction
bgruening/chembl
interactive_tool_odv
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bgruening/ctb_silicos_qed
interactive_tool_jupyter_notebook
devteam/clustalw
galaxyp/unipept
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bgruening/bg_uniq
Convert characters1
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iuc/umi_tools_extract
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devteam/samtools_calmd
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bgruening/music_manipulate_eset
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iuc/mothur_rarefaction_single
iuc/mothur_heatmap_sim
iuc/mothur_dist_shared
iuc/mothur_dist_seqs
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iuc/mothur_cluster
iuc/mothur_chimera_vsearch
devteam/XY_Plot_1
iuc/krakentools_kreport2krona
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interactive_tool_phinch
__BUILD_LIST__
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addValue
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galaxyp/cardinal_preprocessing
galaxyp/cardinal_combine
galaxyp/cardinal_classification
bgruening/join_files_on_column_fuzzy
recetox/waveica
recetox/riassigner
recetox/ramclustr_define_experiment
recetox/ramclustr
recetox/matchms_similarity
recetox/matchms_formatter
recetox/matchms_filtering
gga/list_organism
gga/create_account
iuc/red
iuc/bedtools_maskfastabed
csbl/repeatmodeler
iuc/snap_training
bgruening/augustus_training
iuc/ncbi_acc_download
iuc/bp_genbank2gff3
cpt/edu.tamu.cpt.gff3.customGbkToGff
bgruening/ctb_simsearch
bgruening/openbabel_remDuplicates
bgruening/antismash
iuc/rapidnj
iuc/orfipy
bgruening/bg_diamond_view
bgruening/bg_diamond_makedb
iuc/mageck_test
iuc/mageck_mle
iuc/mageck_count
iuc/feelnc
Extract_features1
iuc/funannotate_compare
iuc/funannotate_annotate
iuc/aegean_parseval
iuc/gecko
iuc/plasmidfinder
iuc/isescan
iuc/integron_finder
simon-gladman/fasta-stats
galaxyp/PeakPickerHiRes
galaxyp/MSGFPlusAdapter
galaxyp/IDMerger
galaxyp/IDFilter
galaxyp/ConsensusID
PeakPickerHiRes
FileConverter
PeptideIndexer
MzTabExporter
MSGFPlusAdapter
IDMerger
IDMapper
IDFilter
IDConflictResolver
HighResPrecursorMassCorrector
FileMerger
FileFilter
FeatureFinderMultiplex
FalseDiscoveryRate
ConsensusID
galaxyp/mz_to_sqlite
jay/pdaug_tsvtofasta
jay/pdaug_peptide_sequence_analysis
jay/pdaug_peptide_data_access
jay/pdaug_fishers_plot
galaxyp/flashlfq
galaxyp/translate_bed
galaxyp/gffcompare_to_bed
galaxyp/custom_pro_db
galaxyp/bed_to_protein_map
galaxyp/peptide_genomic_coordinate
galaxyp/pep_pointer
galaxyp/encyclopedia_searchtolib
galaxyp/encyclopedia_quantify
galaxyp/ProteinQuantifier
galaxyp/MultiplexResolver
galaxyp/IDMapper
galaxyp/IDConflictResolver
galaxyp/FeatureFinderMultiplex
proteore/reactome_analysis
proteore/cluter_profiler
jay/pdaug_ml_models
galaxyp/TargetedFileConverter
galaxyp/OpenSwathDecoyGenerator
galaxyp/OpenSwathAssayGenerator
galaxyp/diapysef
galaxyp/DecoyDatabase
proteore/prot_features
proteore/retr_pepatlas1
galaxyp/pyprophet_score
galaxyp/pyprophet_protein
galaxyp/pyprophet_peptide
galaxyp/pyprophet_merge
galaxyp/pyprophet_export
galaxyp/OpenSwathWorkflow
peterjc/wolf_psort
term_id_vs_term_name
get_subontology_from
iuc/fgsea
iuc/egsea
iuc/trinotate
iuc/trinity_samples_qccheck
iuc/trinity_run_de_analysis
iuc/trinity_filter_low_expr_transcripts
iuc/trinity_define_clusters_by_cutting_tree
iuc/trinity_contig_exn50_statistic
iuc/trinity_analyze_diff_expr
iuc/trinity_align_and_estimate_abundance
iuc/trinity_abundance_estimates_to_matrix
iuc/trinity
iuc/transdecoder
iuc/describe_samples
iuc/goslimmer
iuc/goenrichment
rnateam/targetfinder
rnateam/rbc_mirdeep2_quantifier
rnateam/rbc_mirdeep2_mapper
peterjc/sample_seqs
nilesh/rseqc_junction_saturation
nilesh/rseqc_junction_annotation
nilesh/rseqc_inner_distance
iuc/rna_quast
iuc/isoformswitchanalyzer
bgruening/pfamscan
bgruening/cpat
CONVERTER_fasta_to_tabular
iuc/chira_quantify
iuc/chira_merge
iuc/chira_map
iuc/chira_extract
iuc/chira_collapse
rnateam/rcas
rnateam/peakachu
iuc/umi_tools_dedup
iuc/bedtools_slopbed
iuc/bedtools_genomecoveragebed_bedgraph
iuc/bctools_extract_alignment_ends
rnateam/blockclust
rnateam/blockbuster
devteam/samtools_sort
iuc/bedtools_bamtofastq
devteam/samtool_filter2
devteam/fastq_manipulation
iuc/heinz_visualization
iuc/heinz_scoring
iuc/heinz_bum
iuc/heinz
imgteam/ip_2d_split_binaryimage_by_watershed
imgteam/ip_2d_filter_segmentation_by_features
imgteam/ip_2d_feature_extraction
imgteam/ip_overlay_images
imgteam/ip_imageinfo
imgteam/ip_count_objects
imgteam/ip_binary_to_labelimage
imgteam/ip_histogram_equalization
perssond/quantification
perssond/unet_coreograph
perssond/basic_illumination
perssond/ashlar
goeckslab/vitessce_spatial
goeckslab/scimap_phenotyping
goeckslab/scimap_mcmicro_to_anndata
goeckslab/rename_tiff_channels
goeckslab/mesmer
bgruening/cp_track_objects
bgruening/cp_tile
bgruening/cp_overlay_outlines
bgruening/cp_color_to_gray
iuc/idr_download_by_ids
bgruening/cp_relate_objects
bgruening/cp_measure_texture
bgruening/cp_measure_image_quality
bgruening/cp_measure_image_intensity
bgruening/cp_measure_image_area_occupied
bgruening/cp_measure_granularity
bgruening/cp_mask_image
bgruening/cp_image_math
bgruening/cp_gray_to_color
bgruening/cp_enhance_or_suppress_features
bgruening/cp_display_data_on_image
bgruening/cp_convert_objects_to_image
richard-burhans/ncbi_fcs_adaptor
iuc/ncbi_fcs_gx
iuc/pycoqc
iuc/fastqe
iuc/seqtk_trimfq
iuc/seqtk_mergepe
iuc/qiime_align_seqs
iuc/mothur_degap_seqs
ecology/aligned_to_consensus
ecology/ab1_fastq_converter
devteam/cshl_fastx_reverse_complement
devteam/cshl_fastq_to_fasta
devteam/fastq_masker_by_quality
iuc/bedtools_mergebed
iuc/transit_gumbel
iuc/gff_to_prot
devteam/bowtie_wrapper
bgruening/bg_find_subsequences
nick/sequence_content_trimmer
nick/make_families
nick/dunovo
nick/correct_barcodes
nick/align_families
nick/allele_counts_1
blankenberg/naive_variant_caller
iuc/pathview
iuc/length_and_gc_content
iuc/dexseq_count
iuc/dexseq
iuc/deg_annotate
__TAG_FROM_FILE__
ChangeCase
bgruening/sklearn_numeric_clustering
devteam/velveth
devteam/velvetg
saskia-hiltemann/krona-text
iuc/mothur_make_group
iuc/metaphlan2krona
iuc/metaphlan2
iuc/humann2_renorm_table
iuc/humann2_regroup_table
iuc/humann2
devteam/cshl_fastq_quality_filter
devteam/get_flanks1
CONVERTER_interval_to_bed_0
devteam/vcffilter2
devteam/vcf2tsv