staramr: Scans genome assemblies against the ResFinder, PlasmidFinder, and PointFinder databases searching for AMR genes.

toolshed.g2.bx.psu.edu/repos/nml/staramr/staramr_search/0.10.0+galaxy1

Metadata

Links

bio.tools: staramr

Observed Tool Versions

Within GTN tutorials

0.10.0+galaxy1

0.7.1+galaxy2

0.5.1

Relevant Tutorials

Genome Annotation / Identification of AMR genes in an assembled bacterial genome
Microbiome / Antibiotic resistance detection