Porechop: adapter trimmer for Oxford Nanopore reads

Metadata

Links

• bio.tools:

Observed Tool Versions

Within GTN tutorials

0.2.4

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• GalaxyTrakr
• UseGalaxy.no

0.2.4+galaxy0

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• Galaxy@Pasteur
• GalaxyTrakr
• UseGalaxy.cz
• UseGalaxy.no

0.2.3

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.be
• UseGalaxy.no

Relevant Tutorials

• Assembly / Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• Microbiome / Identification of the micro-organisms in a beer using Nanopore sequencing
• Microbiome / 16S Microbial analysis with Nanopore data
• Microbiome / Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition