hicDetectLoops: searches for enriched regions

Metadata

Links

• bio.tools: HiCExplorer

EDAM Operations

• Standardisation and normalisation
• Validation
• Visualisation

EDAM Topics

• DNA
• Epigenetics
• ChIP-seq
• Workflows
• Chromosome conformation capture

Observed Tool Versions

Within GTN tutorials

3.7.6+galaxy1

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.be
• UseGalaxy.cz

Relevant Tutorials

• Epigenetics / Hi-C analysis of Drosophila melanogaster cells using HiCExplorer