Bandage Image: visualize de novo assembly graphs

Metadata

Links

• bio.tools: Bandage

EDAM Operations

• Sequence assembly visualisation

EDAM Topics

• Sequence assembly
• Genomics

Observed Tool Versions

Within GTN tutorials

2022.09+galaxy4

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• Galaxy@AuBi
• GalaxyTrakr
• MISSISSIPPI
• UseGalaxy.cz
• UseGalaxy.no

0.8.1+galaxy4

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• Galaxy@AuBi

0.8.1+galaxy2

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.be
• UseGalaxy.no

0.8.1+galaxy0

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.be

Relevant Tutorials

• Assembly / ERGA post-assembly QC
• Assembly / Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• Assembly / Chloroplast genome assembly
• Assembly / Large genome assembly and polishing
• Assembly / Assembly of metagenomic sequencing data
• Assembly / Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• Assembly / Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• Microbiome / Assembly of metagenomic sequencing data
• Microbiome / Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• Microbiome / Antibiotic resistance detection