UMI-tools extract: Extract UMI from fastq files

Metadata

Links

• bio.tools: UMI-tools

EDAM Operations

• Sequencing quality control

EDAM Topics

• Quality affairs
• Sequencing
• Sequence sites, features and motifs

Observed Tool Versions

Within GTN tutorials

1.1.2+galaxy2

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• MISSISSIPPI
• UseGalaxy.cz
• UseGalaxy.no

0.5.5.1

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.no

0.5.3.2

• UseGalaxy.eu ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.be

Relevant Tutorials

• Single Cell / Pre-processing of Single-Cell RNA Data
• Single Cell / Understanding Barcodes
• Transcriptomics / CLIP-Seq data analysis from pre-processing to motif detection