medaka consensus pipeline: Assembly polishing via neural networks

Metadata

Links

• bio.tools: Medaka

EDAM Operations

• Variant calling
• Sequence assembly
• Base-calling

EDAM Topics

• Sequence assembly
• Machine learning

Observed Tool Versions

Within GTN tutorials

1.7.2+galaxy1

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.cz

1.7.2+galaxy0

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.cz

Relevant Tutorials

• Assembly / Large genome assembly and polishing
• Microbiome / Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition