Map with minimap2: A fast pairwise aligner for genomic and spliced nucleotide sequences

Metadata

Links

• bio.tools: Minimap2

EDAM Operations

• Sequence alignment

EDAM Topics

• Mapping

Observed Tool Versions

Within GTN tutorials

2.28+galaxy0

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• Galaxy@AuBi
• GalaxyTrakr

2.26+galaxy0

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.cz

2.24+galaxy0

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• Galaxy@AuBi
• UseGalaxy.no

2.17

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.be

2.17+galaxy4

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• GalaxyTrakr

2.17+galaxy2

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️

2.17+galaxy1

• UseGalaxy.eu ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.be

Relevant Tutorials

• Assembly / ERGA post-assembly QC
• Assembly / Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• Assembly / Large genome assembly and polishing
• Assembly / Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
• Microbiome / Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• Microbiome / Antibiotic resistance detection