PCA visualization: - generate trajectories of principal components of atomic motion

Metadata

Links

• bio.tools: Bio3D

EDAM Operations

• Principal component visualisation
• Sequence trimming
• Protein structure analysis
• Essential dynamics
• Molecular dynamics

EDAM Topics

• Structure analysis
• Gene and protein families
• Bioinformatics

Observed Tool Versions

Within GTN tutorials

2.3.4

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• Galaxy@AuBi
• UseGalaxy.be
• UseGalaxy.cz
• UseGalaxy.no

Relevant Tutorials

• Computational chemistry / High Throughput Molecular Dynamics and Analysis