NanoPlot: Plotting suite for Oxford Nanopore sequencing data and alignments

Metadata

Links

• bio.tools: NanoPlot

EDAM Operations

• Scatter plot plotting
• Box-Whisker plot plotting

EDAM Topics

• Genomics

Observed Tool Versions

Within GTN tutorials

1.42.0+galaxy1

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️

1.41.0+galaxy0

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.cz

1.28.2+galaxy1

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• GalaxyTrakr
• UseGalaxy.be
• UseGalaxy.no

1.25.0+galaxy1

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.be
• UseGalaxy.no

Relevant Tutorials

• Assembly / Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• Assembly / Chloroplast genome assembly
• Assembly / Large genome assembly and polishing
• Assembly / Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• Microbiome / Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• Microbiome / Antibiotic resistance detection
• Sequence analysis / Quality Control