Australian BioCommons
Members
These GTN contributors have noted that they are affiliated in some way with this organisation. This list is non-exhaustive, and randomly ordered.
Contributions
The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
Tutorials
- Galaxy Server administration / Galaxy Interactive Tools π΅
- Galaxy Server administration / Upgrading Galaxy π΅
- Galaxy Server administration / Galaxy Monitoring with Reports π΅
- Galaxy Server administration / Mapping Jobs to Destinations using TPV π΅
- Galaxy Server administration / Reference Data with CVMFS π΅
- Galaxy Server administration / Reference Data with Data Managers π΅
- Galaxy Server administration / Running Jobs on Remote Resources with Pulsar π΅
- Galaxy Server administration / Galaxy Installation with Ansible π΅
- Galaxy Server administration / Reference Data with CVMFS without Ansible π΅
- FAIR Data, Workflows, and Research / Uploading Data to Zenodo from Galaxy π΅
- FAIR Data, Workflows, and Research / Integrating InvenioRDM-compatible Repositories with Galaxy π΅
- Ecology / Checking expected species and contamination in bacterial isolate π΅
- Epigenetics / Hi-C analysis of Drosophila melanogaster cells using HiCExplorer π΅
- Epigenetics / ATAC-Seq data analysis π΅
- Epigenetics / Formation of the Super-Structures on the Inactive X π΅
- Genome Annotation / Genome annotation with Prokka π΅
- Genome Annotation / Identification of AMR genes in an assembled bacterial genome π΅
- Using Galaxy and Managing your Data / Downloading and Deleting Data in Galaxy π΅
- Microbiome / 16S Microbial Analysis with mothur (extended) π΅
- Microbiome / Taxonomic Profiling and Visualization of Metagenomic Data π΅
- Microbiome / 16S Microbial Analysis with mothur (short) π΅
- Variant Analysis / M. tuberculosis Variant Analysis π΅
- Variant Analysis / Microbial Variant Calling π΅
- Introduction to Galaxy Analyses / Best Practices for Citing Galaxy π΅
- Introduction to Galaxy Analyses / A short introduction to Galaxy π΅
- Assembly / De Bruijn Graph Assembly π΅
- Assembly / Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step π΅
- Assembly / Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data) π΅
- Assembly / Unicycler Assembly π΅
- Assembly / Large genome assembly and polishing π΅
- Assembly / Hybrid genome assembly - Nanopore and Illumina π΅
- Assembly / An Introduction to Genome Assembly π΅
- Assembly / Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data π΅
- Assembly / Chloroplast genome assembly π΅
- Sequence analysis / Mapping π΅
- Sequence analysis / Quality and contamination control in bacterial isolate using Illumina MiSeq Data π΅
- Sequence analysis / Mapping π΅
- Introduction to Galaxy Analyses / Breve introducciΓ³n a Galaxy - en espaΓ±ol π΅
- Sequence analysis / Mapeo π΅
- Sequence analysis / Mappatura π΅
Events
GitHub Activity
github Issues Reported
News
GTN is now integrated with WorkflowHub
2 September 2025
Thanks to a collaborative effort between the teams at Galaxy Training Network (GTN), WorkflowHub, and Australian BioCommons, GTN workflows are now registered automatically with WorkflowHub. The existing set of workflows can be viewed here: GTN on WorkflowHub. For every new tutorial that is added to the GTN, any workflows that it contains will now also be pushed to WorkflowHub.
GTN is now integrated with WorkflowHub
2 September 2025
Thanks to a collaborative effort between the teams at Galaxy Training Network (GTN), WorkflowHub, and Australian BioCommons, GTN workflows are now registered automatically with WorkflowHub. The existing set of workflows can be viewed here: GTN on WorkflowHub. For every new tutorial that is added to the GTN, any workflows that it contains will now also be pushed to WorkflowHub.