FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
Integrating InvenioRDM-compatible Repositories with Galaxy
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
Making clinical datasets FAIR
Sequence data submission to ENA
Uploading Data to Zenodo from Galaxy
FAIR data management solutions
FAIR Galaxy Training Material
FAIR Bioimage Metadata
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
FAIRification of an RNAseq dataset

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
Exporting Workflow Run RO-Crates from Galaxy
RO-Crate in Python
Best practices for workflows in GitHub repositories
Submitting workflows to LifeMonitor

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
Metadata
Data Registration
Access
Persistent Identifiers

DataPLANT ARCs

This set of tutorials will introduce you to DataPLANT ARCs, and all the relevant tools to create your own ARCs

Lesson Slides Hands-on Recordings Input dataset Workflows
DataPLANT ARCs

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
An earth-system RO-Crate
Data management in Medicinal Chemistry

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

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Contributors

This material was contributed to by:

orcid logoLeonid Kostrykin avatar Leonid Kostrykinorcid logoArmin Dadras avatar Armin DadrasKellie Snow avatar Kellie Snoworcid logoBjörn Grüning avatar Björn Grüningorcid logoXenia Perez Sitja avatar Xenia Perez SitjaStella Eggels avatar Stella EggelsLaura Cooper avatar Laura Cooperorcid logoAndrew Mason avatar Andrew Masonorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-SerraSonal Henson avatar Sonal Hensonorcid logoHelena Rasche avatar Helena Rascheorcid logoDominik Brilhaus avatar Dominik Brilhausorcid logoKatarzyna Kamieniecka avatar Katarzyna KamienieckaKorneel Hens avatar Korneel Hensorcid logoTeresa Müller avatar Teresa Müllerorcid logoKhaled Jum'ah avatar Khaled Jum'ahorcid logoSabrina Zander avatar Sabrina Zanderorcid logoMunazah Andrabi avatar Munazah AndrabiGareth Price avatar Gareth Priceorcid logoMarco Enrico Piras avatar Marco Enrico Pirasorcid logoCristina Martins Rodrigues avatar Cristina Martins RodriguesDavid López avatar David Lópezorcid logoGabriela Lopez-Gonzalez avatar Gabriela Lopez-Gonzalezorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoKevin Frey avatar Kevin Freyorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoSara Morsy avatar Sara Morsyorcid logoRobert Andrews avatar Robert Andrewsorcid logoNick Juty avatar Nick Jutyorcid logoSaskia Lawson-Tovey avatar Saskia Lawson-ToveyLaura Cooper avatar Laura Cooperorcid logoWendi Bacon avatar Wendi BaconMarie Josse avatar Marie Josseorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoLuca Pireddu avatar Luca PiredduSandra Ng avatar Sandra Ngorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoMartin Čech avatar Martin Čechorcid logoPaul De Geest avatar Paul De Geestorcid logoBruno P. Kinoshita avatar Bruno P. Kinoshitaorcid logoSimone Leo avatar Simone Leoorcid logoMartin Kuhl avatar Martin Kuhlorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoEli Chadwick avatar Eli Chadwickorcid logoJulia Jakiela avatar Julia Jakielaorcid logoBranka Franicevic avatar Branka Franicevicorcid logoEmily Angiolini avatar Emily AngioliniTim Beck avatar Tim Beckorcid logoPeter Sefton avatar Peter Seftonorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

Funding

These individuals or organisations provided funding support for the development of this resource