FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
Integrating InvenioRDM-compatible Repositories with Galaxy
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
Making clinical datasets FAIR
Sequence data submission to ENA
Uploading Data to Zenodo from Galaxy
FAIR data management solutions
FAIR Galaxy Training Material
FAIR Bioimage Metadata
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
FAIRification of an RNAseq dataset

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
Exporting Workflow Run RO-Crates from Galaxy
RO-Crate in Python
Best practices for workflows in GitHub repositories
Submitting workflows to LifeMonitor

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
Metadata
Data Registration
Access
Persistent Identifiers

DataPLANT ARCs

This set of tutorials will introduce you to DataPLANT ARCs, and all the relevant tools to create your own ARCs

Lesson Slides Hands-on Recordings Input dataset Workflows
DataPLANT ARCs

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
An earth-system RO-Crate
Data management in Medicinal Chemistry

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

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Contributors

This material was contributed to by:

orcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoTeresa Müller avatar Teresa Müllerorcid logoSaskia Lawson-Tovey avatar Saskia Lawson-Toveyorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoMarco Enrico Piras avatar Marco Enrico Pirasorcid logoSara Morsy avatar Sara Morsyorcid logoRobert Andrews avatar Robert Andrewsorcid logoSabrina Zander avatar Sabrina ZanderStella Eggels avatar Stella Eggelsorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoEmily Angiolini avatar Emily AngioliniMarie Josse avatar Marie JosseSonal Henson avatar Sonal Hensonorcid logoMartin Čech avatar Martin Čechorcid logoBruno P. Kinoshita avatar Bruno P. Kinoshitaorcid logoPeter Sefton avatar Peter Seftonorcid logoJulia Jakiela avatar Julia Jakielaorcid logoCristina Martins Rodrigues avatar Cristina Martins Rodriguesorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoLeonid Kostrykin avatar Leonid Kostrykinorcid logoWendi Bacon avatar Wendi Baconorcid logoMunazah Andrabi avatar Munazah AndrabiGareth Price avatar Gareth Priceorcid logoEli Chadwick avatar Eli Chadwickorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoBjörn Grüning avatar Björn Grüningorcid logoKevin Rue-Albrecht avatar Kevin Rue-Albrechtorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoLuca Pireddu avatar Luca Piredduorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoHelena Rasche avatar Helena Rascheorcid logoNick Juty avatar Nick JutySandra Ng avatar Sandra NgDavid López avatar David Lópezorcid logoPaul De Geest avatar Paul De Geestorcid logoAndrew Mason avatar Andrew MasonLaura Cooper avatar Laura Cooperorcid logoArmin Dadras avatar Armin Dadrasorcid logoKevin Frey avatar Kevin Freyorcid logoSimone Leo avatar Simone Leoorcid logoMartin Kuhl avatar Martin Kuhlorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowiczorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-Serraorcid logoGabriela Lopez-Gonzalez avatar Gabriela Lopez-GonzalezTim Beck avatar Tim BeckLaura Cooper avatar Laura Cooperorcid logoXenia Perez Sitja avatar Xenia Perez SitjaKellie Snow avatar Kellie Snoworcid logoBranka Franicevic avatar Branka Franicevicorcid logoKhaled Jum'ah avatar Khaled Jum'ahorcid logoDominik Brilhaus avatar Dominik BrilhausKorneel Hens avatar Korneel Hens

Funding

These individuals or organisations provided funding support for the development of this resource