FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
Integrating InvenioRDM-compatible Repositories with Galaxy
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
Making clinical datasets FAIR
Sequence data submission to ENA
Uploading Data to Zenodo from Galaxy
FAIR data management solutions
FAIR Galaxy Training Material
FAIR Bioimage Metadata
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
FAIRification of an RNAseq dataset

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
Exporting Workflow Run RO-Crates from Galaxy
RO-Crate in Python
Best practices for workflows in GitHub repositories
Submitting workflows to LifeMonitor

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
Metadata
Data Registration
Access
Persistent Identifiers

DataPLANT ARCs

This set of tutorials will introduce you to DataPLANT ARCs, and all the relevant tools to create your own ARCs

Lesson Slides Hands-on Recordings Input dataset Workflows
DataPLANT ARCs

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
An earth-system RO-Crate
Data management in Medicinal Chemistry

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

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Contributors

This material was contributed to by:

orcid logoLeonid Kostrykin avatar Leonid KostrykinLaura Cooper avatar Laura Cooperorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoYvan Le Bras avatar Yvan Le BrasSonal Henson avatar Sonal Hensonorcid logoArmin Dadras avatar Armin Dadrasorcid logoMunazah Andrabi avatar Munazah Andrabiorcid logoSabrina Zander avatar Sabrina Zanderorcid logoDominik Brilhaus avatar Dominik BrilhausMarie Josse avatar Marie JosseSandra Ng avatar Sandra Ngorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoJulia Jakiela avatar Julia Jakielaorcid logoKhaled Jum'ah avatar Khaled Jum'ahDavid López avatar David Lópezorcid logoKevin Frey avatar Kevin Freyorcid logoSimone Leo avatar Simone Leoorcid logoGabriela Lopez-Gonzalez avatar Gabriela Lopez-Gonzalezorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-Serraorcid logoSaskia Lawson-Tovey avatar Saskia Lawson-Toveyorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoSara Morsy avatar Sara Morsyorcid logoWendi Bacon avatar Wendi Baconorcid logoCristina Martins Rodrigues avatar Cristina Martins Rodriguesorcid logoHelena Rasche avatar Helena Rascheorcid logoMarco Enrico Piras avatar Marco Enrico Pirasorcid logoXenia Perez Sitja avatar Xenia Perez SitjaStella Eggels avatar Stella EggelsTim Beck avatar Tim Beckorcid logoEli Chadwick avatar Eli Chadwickorcid logoMartin Kuhl avatar Martin Kuhlorcid logoAndrew Mason avatar Andrew Masonorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowiczorcid logoStian Soiland-Reyes avatar Stian Soiland-ReyesGareth Price avatar Gareth Priceorcid logoTeresa Müller avatar Teresa Müllerorcid logoBranka Franicevic avatar Branka Franicevicorcid logoPeter Sefton avatar Peter SeftonKellie Snow avatar Kellie Snoworcid logoBjörn Grüning avatar Björn Grüningorcid logoBruno P. Kinoshita avatar Bruno P. Kinoshitaorcid logoMartin Čech avatar Martin Čechorcid logoEmily Angiolini avatar Emily Angioliniorcid logoRobert Andrews avatar Robert AndrewsKorneel Hens avatar Korneel Hensorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoNick Juty avatar Nick Jutyorcid logoLuca Pireddu avatar Luca Piredduorcid logoPaul De Geest avatar Paul De GeestLaura Cooper avatar Laura Cooper

Funding

These individuals or organisations provided funding support for the development of this resource