Using Galaxy and Managing your Data

A collection of microtutorials explaining various features of the Galaxy user interface and manipulating data within Galaxy.

Requirements

Before diving into this topic, we recommend you to have a look at:

• tutorial Hands-on: Galaxy Basics for genomics

Material

Uploading Data

These tutorials will help you get data into Galaxy, before you analyse it.

Histories

Managing your analysis histories efficiently

Making Data Manageable

Now that you have data in Galaxy, let's make it easier to work with through collections and structured data.

Workflows

Using Galaxy workflows to scale analysis

Analysing Data

Some advanced topics in data analysis.

Download and free up space

Once you are done with your analyses in Galaxy, it's time to download your data and free up space.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Jennifer Hillman-Jackson

Delphine Lariviere

Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

Teresa Müller

Yvan Le Bras

Bert Droesbeke

Simon Gladman

Lucille Delisle

Avani Khadilkar

Clea Siguret

William Durand

Aysam Guerler

John Chilton

Maria Doyle

Saskia Hiltemann

Enis Afgan

Wolfgang Maier

Anne Fouilloux

Anthony Bretaudeau

Simon Bray

Fotis E. Psomopoulos

Jon Trow

Ahmed Hamid Awan

Toby Hodges

Boris Depoortere

Wendi Bacon

Nadia Goué

Bérénice Batut

Lisanna Paladin

Nic Herndon

Bartosz Walkowicz

Helena Rasche

Deepti Varshney

Łukasz Opioła

Daniela Butano

Anne Pajon

Miguel Roncoroni

Delphine Lariviere

Daniela Schneider

Laila Los

Niall Beard

Armin Dadras

Martin Čech

Ekaterina Polkh

Dave Clements

Nate Coraor

Marius van den Beek

Charles Overbeck

Adelaide Rhodes

Anton Nekrutenko

Mateusz Kuzak

Yo Yehudi

Björn Grüning

Cristóbal Gallardo

Nicola Soranzo

Elizabeth Sheets

Funding

These individuals or organisations provided funding support for the development of this resource

de.NBI

ELIXIR Europe

ABRomics

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

UFR

IFB

BioNT

Co-funded by the European Union

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.