Using Galaxy and Managing your Data

A collection of microtutorials explaining various features of the Galaxy user interface and manipulating data within Galaxy.

Requirements

Before diving into this topic, we recommend you to have a look at:

• tutorial Hands-on: Galaxy Basics for genomics

Material

Uploading Data

These tutorials will help you get data into Galaxy, before you analyse it.

Histories

Managing your analysis histories efficiently

Making Data Manageable

Now that you have data in Galaxy, let's make it easier to work with through collections and structured data.

Workflows

Using Galaxy workflows to scale analysis

Analysing Data

Some advanced topics in data analysis.

Download and free up space

Once you are done with your analyses in Galaxy, it's time to download your data and free up space.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Jennifer Hillman-Jackson

Delphine Lariviere

Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

Bérénice Batut

Rita Gautschy

John Chilton

Wendi Bacon

Charles Overbeck

Niall Beard

Fotis E. Psomopoulos

Mateusz Kuzak

Deepti Varshney

Saskia Hiltemann

William Durand

Elizabeth Sheets

Toby Hodges

Laila Los

Nic Herndon

Ahmed Hamid Awan

Lisanna Paladin

Anup Kumar

Anne Fouilloux

Martin Čech

Delphine Lariviere

Daniela Butano

Helena Rasche

Avani Khadilkar

Bert Droesbeke

Nadia Goué

Yo Yehudi

Gildas Le Corguillé

Simon Bray

Maria Doyle

Boris Depoortere

Anton Nekrutenko

Teresa Müller

Łukasz Opioła

Jon Trow

Yvan Le Bras

Marius van den Beek

Simon Gladman

Lucille Delisle

Adelaide Rhodes

Cristóbal Gallardo

Anthony Bretaudeau

Ekaterina Polkh

Wolfgang Maier

Armin Dadras

Clea Siguret

Aysam Guerler

Miguel Roncoroni

Nate Coraor

Daniela Schneider

Anne Pajon

Bartosz Walkowicz

Dave Clements

Enis Afgan

Nicola Soranzo

Björn Grüning

Funding

These individuals or organisations provided funding support for the development of this resource

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

ELIXIR Europe

ABRomics

de.KCD

BioNT

Co-funded by the European Union

UFR

MWK

Melbourne Bioinformatics

de.NBI

The University of Melbourne

IFB

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

Australian BioCommons