Using Galaxy and Managing your Data

A collection of microtutorials explaining various features of the Galaxy user interface and manipulating data within Galaxy.

Requirements

Before diving into this topic, we recommend you to have a look at:

• tutorial Hands-on: Galaxy Basics for genomics

Material

Uploading Data

These tutorials will help you get data into Galaxy, before you analyse it.

Histories

Managing your analysis histories efficiently

Making Data Manageable

Now that you have data in Galaxy, let's make it easier to work with through collections and structured data.

Workflows

Using Galaxy workflows to scale analysis

Analysing Data

Some advanced topics in data analysis.

Download and free up space

Once you are done with your analyses in Galaxy, it's time to download your data and free up space.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Jennifer Hillman-Jackson

Delphine Lariviere

Teresa Müller

Contributors

This material was contributed to by:

Cristóbal Gallardo

Nadia Goué

Armin Dadras

Saskia Hiltemann

Deepti Varshney

Charles Overbeck

Niall Beard

Nic Herndon

Ekaterina Polkh

Björn Grüning

Yvan Le Bras

Bert Droesbeke

Bartosz Walkowicz

Maria Doyle

Martin Čech

Teresa Müller

Aysam Guerler

Helena Rasche

Nicola Soranzo

Daniela Butano

William Durand

Lisanna Paladin

Daniela Schneider

Miguel Roncoroni

Elizabeth Sheets

Anne Pajon

Delphine Lariviere

Toby Hodges

Dave Clements

Adelaide Rhodes

Ahmed Hamid Awan

Laila Los

Mateusz Kuzak

Anton Nekrutenko

Yo Yehudi

Anne Fouilloux

Simon Bray

Jon Trow

Anthony Bretaudeau

Marius van den Beek

Avani Khadilkar

Wendi Bacon

Enis Afgan

Lucille Delisle

Fotis E. Psomopoulos

John Chilton

Bérénice Batut

Simon Gladman

Clea Siguret

Łukasz Opioła

Boris Depoortere

Wolfgang Maier

Nate Coraor

Funding

These individuals or organisations provided funding support for the development of this resource

ELIXIR Europe

UFR

IFB

ABRomics

de.NBI

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

BioNT

Co-funded by the European Union

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.