Genome Annotation

Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and other mobile elements.

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Requirements

Before diving into this topic, we recommend you to have a look at:

• Introduction to Galaxy Analyses

Material

Introduction

Start here if you are new to genome annotation in Galaxy.

Prokaryotes

Annotation of prokaryotic genomes.

Eukaryotes

Annotation of eukaryotic genomes.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Simon Gladman

Anthony Bretaudeau

Contributors

This material was contributed to by:

Niall Beard

Alexandre Cormier

Nathan Dunn

Björn Grüning

Laura Leroi

Teresa Müller

Anton Nekrutenko

Twishi Gulati

Maria Doyle

Stéphanie Robin

Saskia Hiltemann

Anna Syme

Anika Erxleben

Jonathan Kreplak

William Durand

Romane LIBOUBAN

Miaomiao Zhou

Simon Gladman

Simon Bray

Nicola Soranzo

Mateo Boudet

Torsten Seemann

Helena Rasche

Ekaterina Polkh

Esteban Perez-Wohlfeil

Delphine Lariviere

Deepti Varshney

Felicitas Kindel

Jasper Ouwerkerk

Cristóbal Gallardo

Bérénice Batut

Bazante Sanders

Anthony Bretaudeau

Erwan Corre

Paul Zierep

Gildas Le Corguillé

Kenji Fujihara

Funding

These individuals or organisations provided funding support for the development of this resource

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

ELIXIR Europe

IFB

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

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