Genome Annotation

Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and other mobile elements.

For any question or discussions related to this topic, or to connect with others in the community, please visit the community chat:

comment   Community Matrix Chat

Requirements

Before diving into this topic, we recommend you to have a look at:

• Introduction to Galaxy Analyses

Material

Introduction

Start here if you are new to genome annotation in Galaxy.

Prokaryotes

Annotation of prokaryotic genomes.

Eukaryotes

Annotation of eukaryotic genomes.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

Follow topic updates rss-feed with our RSS Feed

Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

William Durand

Saskia Hiltemann

Nathan Dunn

Nicola Soranzo

Ekaterina Polkh

Helena Rasche

Esteban Perez-Wohlfeil

Twishi Gulati

Simon Gladman

Cristóbal Gallardo

Romane LIBOUBAN

Paul Zierep

Bérénice Batut

Teresa Müller

Kenji Fujihara

Maria Doyle

Felicitas Kindel

Hélène Chiapello

Jonathan Kreplak

Delphine Lariviere

Anthony Bretaudeau

Niklas Mayle

Niall Beard

Alexandre Cormier

Gildas Le Corguillé

Torsten Seemann

Deepti Varshney

Saim Momin

Stéphanie Robin

Björn Grüning

Bazante Sanders

Miaomiao Zhou

Guillaume Gautreau

Valentin Loux

Mateo Boudet

Tristan Reynolds

Jasper Ouwerkerk

Simon Bray

Anna Syme

Laura Leroi

Anton Nekrutenko

Erwan Corre

Anika Erxleben

Funding

These individuals or organisations provided funding support for the development of this resource

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

ABRomics

ELIXIR Europe

Melbourne Bioinformatics

IFB

Avans

Australian BioCommons

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

The University of Melbourne