Contributing to the Galaxy Training Material

Galaxy is a great solution to train the bioinformatics concepts: numerous bioinformatics tools are available (more than 7,000 in the ToolShed), it can be used by people without any computer science skills, it trains to use technology, outlining available resources and efforts that have made them accessible to researchers, it is scalable.
In 2016, the Galaxy Training Network decided to set up a new infrastructure for delivering easily Galaxy related training material. The idea was to develop something open and online based on a community effort, as always in Galaxy.

Material

Before you start: Designing your lessons

These tutorials will guide you on the pedagogy to create impactful training material

Getting Started with the GTN

These tutorials will get you started with the basics needed to contribute to the GTN. First we will show you how you can build the GTN website on GitPod or locally, and then the basics of creating tutorials and slides.

Advanced GTN Materials writing

Tutorials showing you how to use some advanced GTN features in your training materials.

Contributing through GitHub

How to collaborate with the GTN

Analyses using GTN data

Over the years publications about the GTN and GTN communities have been published, and used GTN (meta)data to do it. These tutorials will show you how to leverage some of the data already contained within the GTN, but beware, they generally require programming skills!

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Bérénice Batut

Björn Grüning

Contributors

This material was contributed to by:

Julia Jakiela

Wendi Bacon

Bazante Sanders

Pavankumar Videm

Аrnaud Gingold

Vojdan Kjorveziroski

Cristóbal Gallardo

Donny Vrins

Melissa Burke

Katarzyna Kamieniecka

Gildas Le Corguillé

Phil Reed

Simon Bray

Armin Dadras

Andrea Bagnacani

Lucille Delisle

Sonja Filiposka

Marie Josse

William Durand

Anastas Mishev

Helena Rasche

Marisa Loach

Mehmet Tekman

Irakleitos Souyioultzoglou

Marius van den Beek

Anthony Bretaudeau

Allegra Via

Achim Winandi

Simon Gladman

Bérénice Batut

Fotis E. Psomopoulos

Pablo Moreno

Bert Droesbeke

Christine Hadrossek

Nicola Soranzo

Linelle Abueg

Carolin Leister

Saskia Hiltemann

Peter van Heusden

Krzysztof Poterlowicz

Cyril Monjeaud

Björn Grüning

Patricia Palagi

Dominique Green

Teresa Müller

Martin Čech

Niall Beard

Funding

These individuals or organisations provided funding support for the development of this resource

Skills4SEOSC

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

DASH UK

This Fellowship was funded through the ELIXIR-UK DaSH project as part of the UKRI Innovation Scholars: Data Science Training in Health and Bioscience call (DaSH). (MR/V038966/1). The project aims to embed Research Data Management (RDM) know-how into UK universities and institutes by producing and delivering training in FAIR data stewardship using ELIXIR-UK knowledge and resources.

de.NBI

UFR

ELIXIR Europe