Nate Coraor

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

Editorial Roles

This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.

• Galaxy Server administration
• Admin Training Course

Tutorials

• Galaxy Server administration / Mapping Jobs to Destinations using TPV ✍️
• Galaxy Server administration / Server Maintenance: Cleanup, Backup, and Restoration ✍️
• Galaxy Server administration / Running Jobs on Remote Resources with Pulsar
• Galaxy Server administration / Galaxy Installation with Ansible ✍️
• Galaxy Server administration / Distributed Object Storage
• Galaxy Server administration / External Authentication
• Galaxy Server administration / How I learned to stop worrying and love the systemd 📝 ⚙️
• Galaxy Server administration / Galaxy Interactive Tools ✍️
• Galaxy Server administration / Deploying Tailscale/Headscale for private mesh networking 📝
• Galaxy Server administration / Reference Data with Data Managers 📝
• Galaxy Server administration / Galaxy Monitoring with Reports
• Galaxy Server administration / Connecting Galaxy to a compute cluster

Slides

• Galaxy Server administration / Galactic Database
• Galaxy Server administration / Galaxy Monitoring with gxadmin
• Galaxy Server administration / Server Maintenance: Cleanup, Backup, and Restoration
• Galaxy Server administration / Running Jobs on Remote Resources with Pulsar
• Galaxy Server administration / Galaxy Installation with Ansible ✍️
• Galaxy Server administration / Controlling Galaxy with systemd or Supervisor
• Galaxy Server administration / User, Role, Group, Quota, and Authentication managment ✍️
• Galaxy Server administration / Storage Management
• Galaxy Server administration / Galaxy Monitoring
• Galaxy Server administration / Storage Management
• Galaxy Server administration / Galaxy Monitoring with Telegraf and Grafana
• Galaxy Server administration / Gearing towards production
• Galaxy Server administration / Galaxy Troubleshooting
• Galaxy Server administration / Galaxy Interactive Tools
• Galaxy Server administration / Galaxy from an administrator's point of view
• Galaxy Server administration / Server: Other
• Galaxy Server administration / uWSGI
• Galaxy Server administration / Connecting Galaxy to a compute cluster ✍️

FAQs

• Define once, reference many times
• Database Issues
• Blank page or no CSS/JavaScript
• Debugging tool errors
• Debugging tool memory errors
• Tool missing from Galaxy
• Galaxy UI is slow
• Launch RStudio
• Mapping Jobs to Specific Storage By User

Video Recordings

• Galaxy Server administration / Galaxy Installation with Ansible 💬 🗣

Events

• Admin Training @ GCC 2022: Online Training Day 🧑‍🏫
• 2023 Galaxy Admin Training (Ghent) 🧑‍🏫
• Galaxy Training Academy 2024 🧑‍🏫

GitHub Activity

github Issues Reported

44 Merged Pull Requests

See all of the github Pull Requests and github Commits by Nate Coraor.

• Update the admin troubleshooting slides
  admin
• Update cluster slides
  admin
• Run tusd with gravity
  admin
• Update tpv-auto-lint
  admin
• Updates to *Installing Galaxy with Ansible*
  admin

Reviewed 41 PRs

We love our community reviewing each other's work!

• Very short introductions: QC
  introduction
• Update microbiome pURLs
  template-and-tools
• add FAQ about upgrading through 22.05
  admin
• fix ansible-vault diff
  admin
• GAT 2023 Day 3
  admin
  template-and-tools
  news

External Links

Favourite Topics

Favourite Formats