Training material for all kinds of transcriptomics analysis.


Before diving into this topic, we recommend you to have a look at:


Lesson Slides Hands-on Input dataset Workflows Galaxy tour Galaxy instances
Introduction to Transcriptomics slides
CLIP-Seq data analysis from pre-processing to motif detection tutorial zenodo_link workflow
De novo transcriptome reconstruction with RNA-Seq tutorial zenodo_link workflow interactive_tour
Differential abundance testing of small RNAs tutorial zenodo_link workflow interactive_tour
Network analysis with Heinz
metatranscriptomics network analysis
slides tutorial zenodo_link workflow
Reference-based RNA-Seq data analysis tutorial zenodo_link workflow interactive_tour
Reference-based RNAseq data analysis (long) tutorial
Visualization of RNA-Seq results with CummeRbund slides tutorial zenodo_link workflow interactive_tour

Galaxy instances

You can use a public Galaxy instance which has been tested for the availability of the used tools. They are listed along with the tutorials above.


This material is maintained by:

For any question related to this topic and the content, you can contact them or visit our Gitter channel.


This material was contributed to by: