Workflows

These workflows are associated with Visualization of RNA-Seq results with Volcano Plot

To use these workflows in Galaxy you can either click the links to download the workflows, or you can right-click and copy the link to the workflow which can be used in the Galaxy form to import workflows.

Visualization Of RNA-Seq Results With Volcano Plot

Last updated Jun 18, 2021

Launch in Tutorial Mode question
License: None Specified, defaults to CC-BY-4.0
Tests: ✅ Results: Not yet automated

flowchart TD
  0["ℹ️ Input Dataset\nDE results"];
  style 0 stroke:#2c3143,stroke-width:4px;
  1["ℹ️ Input Dataset\nVolcano genes"];
  style 1 stroke:#2c3143,stroke-width:4px;
  2["Volcano plot highlighting significant"];
  0 -->|output| 2;
  3["Volcano plot labelling top 10"];
  0 -->|output| 3;
  4["Volcano plot labelling genes of interest"];
  0 -->|output| 4;
  1 -->|output| 4;
  16aef53e-11fd-4def-a7fb-6cf9a98f0902["Output\nvolcano_pdf"];
  4 --> 16aef53e-11fd-4def-a7fb-6cf9a98f0902;
  style 16aef53e-11fd-4def-a7fb-6cf9a98f0902 stroke:#2c3143,stroke-width:4px;
	

Importing into Galaxy

Below are the instructions for importing these workflows directly into your Galaxy server of choice to start using them!
Hands-on: Importing a workflow
  • Click on Workflow on the top menu bar of Galaxy. You will see a list of all your workflows.
  • Click on galaxy-upload Import at the top-right of the screen
  • Provide your workflow
    • Option 1: Paste the URL of the workflow into the box labelled “Archived Workflow URL”
    • Option 2: Upload the workflow file in the box labelled “Archived Workflow File”
  • Click the Import workflow button

Below is a short video demonstrating how to import a workflow from GitHub using this procedure: