Genome Annotation

Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and other mobile elements.

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Requirements

Before diving into this topic, we recommend you to have a look at:

• Introduction to Galaxy Analyses

Material

Introduction

Start here if you are new to genome annotation in Galaxy.

Prokaryotes

Annotation of prokaryotic genomes.

Eukaryotes

Annotation of eukaryotic genomes.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Delphine Lariviere

Simon Gladman

Torsten Seemann

Bazante Sanders

Miaomiao Zhou

Nathan Dunn

Paul Zierep

Saskia Hiltemann

Laura Leroi

Björn Grüning

Maria Doyle

Ekaterina Polkh

Teresa Müller

Jonathan Kreplak

Jasper Ouwerkerk

Bérénice Batut

Alexandre Cormier

Anika Erxleben

Hélène Chiapello

Erwan Corre

Esteban Perez-Wohlfeil

Felicitas Kindel

Romane LIBOUBAN

Nicola Soranzo

Niall Beard

Mateo Boudet

Cristóbal Gallardo

Stéphanie Robin

Anna Syme

Kenji Fujihara

Valentin Loux

Twishi Gulati

Helena Rasche

Gildas Le Corguillé

William Durand

Deepti Varshney

Anthony Bretaudeau

Anton Nekrutenko

Guillaume Gautreau

Simon Bray

Funding

These individuals or organisations provided funding support for the development of this resource

IFB

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

ABRomics

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

ELIXIR Europe

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