Genome Annotation

Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and other mobile elements.

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Requirements

Before diving into this topic, we recommend you to have a look at:

• Introduction to Galaxy Analyses

Material

Introduction

Start here if you are new to genome annotation in Galaxy.

Prokaryotes

Annotation of prokaryotic genomes.

Eukaryotes

Annotation of eukaryotic genomes.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Kenji Fujihara

Teresa Müller

Twishi Gulati

Valentin Loux

Niall Beard

Anton Nekrutenko

Alexandre Cormier

Stéphanie Robin

Gildas Le Corguillé

Esteban Perez-Wohlfeil

Ekaterina Polkh

Torsten Seemann

Cristóbal Gallardo

Delphine Lariviere

Bérénice Batut

Erwan Corre

Saskia Hiltemann

Felicitas Kindel

Mateo Boudet

Hélène Chiapello

Miaomiao Zhou

Nicola Soranzo

Bazante Sanders

Jonathan Kreplak

William Durand

Simon Bray

Anika Erxleben

Romane LIBOUBAN

Nathan Dunn

Helena Rasche

Deepti Varshney

Anna Syme

Guillaume Gautreau

Maria Doyle

Laura Leroi

Paul Zierep

Anthony Bretaudeau

Jasper Ouwerkerk

Simon Gladman

Björn Grüning

Funding

These individuals or organisations provided funding support for the development of this resource

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

ABRomics

IFB

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

ELIXIR Europe

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