Diana Chiang Jurado

Affiliations

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

1 Editorial Role

This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.

• Topic: Single Cell

21 Tutorials

• Single Cell / Multi-sample batch correction with Harmony and SnapATAC2 📝 🧐
• Single Cell / Clustering 3K PBMCs with Scanpy ✍️ 🧐
• Single Cell / Pseudobulk Analysis with Decoupler and EdgeR ✍️ 🧐
• Imaging / Quantitative Analysis of Histological Staining Using Color Deconvolution ✍️ 🧐
• Imaging / Voronoi segmentation 📝
• Imaging / Segmentation of Anatomical Structures in Medical 3-D Images 🧐
• Imaging / Content Tracking and Verification in Galaxy Workflows with ISCC-SUM 🧐
• Imaging / Where to start with bioimage analysis in Galaxy ✍️ 🧐
• Imaging / Using BioImage.IO models for image analysis in Galaxy ✍️ 🧐
• Imaging / Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools ✍️ 🧐
• Imaging / Tracking of mitochondria and capturing mitoflashes ✍️ 🧐
• Digital Humanities / OpenRefine Tutorial for researching cultural data ✍️ 🧐

10 Video Recordings

• Single Cell / Pseudobulk Analysis with Decoupler and EdgeR 💬 🗣
• Sequence analysis / Quality Control 💬 🗣
• Sequence analysis / Qualitätskontrolle 💬 🗣
• Sequence analysis / Control de calidad 💬 🗣
• Sequence analysis / Controllo qualità 💬 🗣

7 Events

• Galaxy Training Academy 2025 🎪 🧑‍🏫
• From Data to Discovery: Metagenomics, RNA-Seq - NGS Bioinformatics with Galaxy 🧑‍🏫
• LOVE DATA week with intro to Galaxy & GTN 🎪
• Workshop on high-throughput sequencing data analysis with Galaxy 🧑‍🏫
• Galaxy Training Academy 2026 🧑‍🏫
• Galaxy Training Academy 2024 🧑‍🏫

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GitHub Activity

github Issues Reported

15 Merged Pull Requests

See all of the github Pull Requests and github Commits by Diana Chiang Jurado.

• New tutorial: Quantitative Analysis of Histological Staining Using Color Deconvolution
  imaging
• Add automated cell type annotation with CellTypist to Clustering 3K PBMCs with Scanpy tutorial and Vitessce visalization
  single-cell
• fix: update Zenodo links to direct file links
  imaging
• Add CYOA feature to split Voronoi segmentation tutorial by scientific field
  imaging
• Add tutorial: Where to start with bioimage analysis in Galaxy
  imaging

Reviewed 13 PRs

We love our community reviewing each other's work!

• New tutorial: Quantitative Analysis of Histological Staining Using Color Deconvolution
  imaging
• Add automated cell type annotation with CellTypist to Clustering 3K PBMCs with Scanpy tutorial and Vitessce visalization
  single-cell
• Add tutorial: Where to start with bioimage analysis in Galaxy
  imaging
• Add tutorial: Segmentation of Anatomical Structures in Medical 3-D Images
  imaging
  faqs
• Create a new tutorial on the ISCC-SUM suite
  template-and-tools
  imaging

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