Diana Chiang Jurado

Affiliations

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

2 Editorial Roles

This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.

• Topic: Imaging
• Topic: Single Cell

26 Tutorials

• Single Cell / Pseudobulk Analysis with Decoupler and EdgeR ✍️ 🧐
• Single Cell / Multi-sample batch correction with Harmony and SnapATAC2 📝 🧐
• Single Cell / Batch Correction and Integration with Seurat or Scanpy 📝 🧐
• Single Cell / Clustering 3K PBMCs with Scanpy ✍️ 🧐
• Digital Humanities / OpenRefine Tutorial for researching cultural data ✍️ 🧐
• Imaging / Voronoi segmentation 📝
• Imaging / Using BioImage.IO models for image analysis in Galaxy ✍️ 🧐
• Imaging / Where to start with bioimage analysis in Galaxy ✍️ 🧐
• Imaging / Use Pycytominer in Galaxy for processing high dimensional image-based readouts 📝 🧐
• Imaging / Content Tracking and Verification in Galaxy Workflows with ISCC-SUM 🧐
• Imaging / Tracking of mitochondria and capturing mitoflashes ✍️ 🧐
• Imaging / Segmentation of Anatomical Structures in Medical 3-D Images 🧐
• Imaging / Quantitative Analysis of Histological Staining Using Color Deconvolution ✍️ 🧐
• Imaging / Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools ✍️ 🧐
• Imaging / Introduction to Image Analysis using Galaxy ✍️

10 Video Recordings

• Single Cell / Pseudobulk Analysis with Decoupler and EdgeR 💬 🗣
• Sequence Analysis / Quality Control 💬 🗣
• Sequence Analysis / Qualitätskontrolle 💬 🗣
• Sequence Analysis / Control de calidad 💬 🗣
• Sequence Analysis / Controllo qualità 💬 🗣

9 Events

• Galaxy Training Academy 2025 🎪 🧑‍🏫
• From Data to Discovery: Metagenomics, RNA-Seq - NGS Bioinformatics with Galaxy 🧑‍🏫
• LOVE DATA week with intro to Galaxy & GTN 🎪
• Workshop on high-throughput sequencing data analysis with Galaxy 🧑‍🏫
• Galaxy Training Academy 2026 🧑‍🏫
• IBSB 2026: Bioimage Analysis with Galaxy (Workshop + Symposium Talk) 🎪
• Workshop on high-throughput sequencing data analysis with Galaxy 🧑‍🏫
• Galaxy Training Academy 2024 🧑‍🏫

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GitHub Activity

github Issues Reported

18 Merged Pull Requests

See all of the github Pull Requests and github Commits by Diana Chiang Jurado.

• minor edits on clarity and grammar
  imaging
• Editing first visualization step of the tutorial now that we have the built-in TIFF preview
  imaging
• add Anup to tutorial metadata under infrastructure
  imaging
• New tutorial: Quantitative Analysis of Histological Staining Using Color Deconvolution
  imaging
• Add automated cell type annotation with CellTypist to Clustering 3K PBMCs with Scanpy tutorial and Vitessce visalization
  single-cell

Reviewed 18 PRs

We love our community reviewing each other's work!

• Pycytominer training
  imaging
• Update `Where to start with bioimage analysis in Galaxy`: Minor updates/fixes
  imaging
• Add Diana as maintainer for imaging topic
  template-and-tools
  imaging
• Bump actions/checkout from 6 to 7
  template-and-tools
  dependencies
  github_actions
• Batch correction tutorial for single cell
  single-cell

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