GMOD

Tutorials from the world of the Generic Model Organism Database (GMOD)

GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.

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Material

JBrowse 1

Learn to use JBrowse v1 here.

MAKER

Genome Annotation with MAKER.

InterMine

InterMine is a data warehouse you can query for interesting features and data.

Apollo v2

Apollo is a collaborative, real time genome annotation editor.

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Paul Zierep

Laura Leroi

Robert Meller

Björn Grüning

Natalie Kucher

Elizabeth Humphries

Nathan Dunn

Bazante Sanders

Katherine Cox

Anton Nekrutenko

Bérénice Batut

Alexandre Cormier

Saskia Hiltemann

Miaomiao Zhou

Jasper Ouwerkerk

Ava Hoffman

Simon Bray

Delphine Lariviere

Frederick Tan

Mateo Boudet

Daniela Butano

Candace Savonen

Stéphanie Robin

Yo Yehudi

Teresa Müller

Cristóbal Gallardo

Anna Syme

Jonathan Kreplak

Tristan Reynolds

Helena Rasche

Erwan Corre

Anthony Bretaudeau

Deepti Varshney

Torsten Seemann

Simon Gladman

Funding

These individuals or organisations provided funding support for the development of this resource

Avans

The University of Melbourne

NHGRI GDS Community Network

IFB

ABRomics

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

Melbourne Bioinformatics

ELIXIR Europe

NHGRI ANVIL

Australian BioCommons