GMOD

Tutorials from the world of the Generic Model Organism Database (GMOD)

GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.

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Material

JBrowse 1

Learn to use JBrowse v1 here.

MAKER

Genome Annotation with MAKER.

InterMine

InterMine is a data warehouse you can query for interesting features and data.

Apollo v2

Apollo is a collaborative, real time genome annotation editor.

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Saskia Hiltemann

Delphine Lariviere

Björn Grüning

Frederick Tan

Jonathan Kreplak

Bérénice Batut

Simon Bray

Natalie Kucher

Teresa Müller

Anthony Bretaudeau

Simon Gladman

Helena Rasche

Stéphanie Robin

Ava Hoffman

Candace Savonen

Alexandre Cormier

Anton Nekrutenko

Laura Leroi

Robert Meller

Cristóbal Gallardo

Torsten Seemann

Nathan Dunn

Yo Yehudi

Anna Syme

Deepti Varshney

Erwan Corre

Elizabeth Humphries

Mateo Boudet

Paul Zierep

Katherine Cox

Miaomiao Zhou

Bazante Sanders

Jasper Ouwerkerk

Daniela Butano

Funding

These individuals or organisations provided funding support for the development of this resource

NHGRI GDS Community Network

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

Avans

ELIXIR Europe

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

IFB

ABRomics

NHGRI ANVIL