Statistics and machine learning

Statistical Analyses for omics data and machine learning using Galaxy tools

Requirements

Before diving into this topic, we recommend you to have a look at:

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.
Lesson Slides Hands-on Recordings Input dataset Workflows
A Docker-based interactive Jupyterlab powered by GPU for artificial intelligence in Galaxy
Age prediction using machine learning
Basics of machine learning
Classification in Machine Learning
Clustering in Machine Learning
Deep Learning (Part 1) - Feedforward neural networks (FNN)
Deep Learning (Part 2) - Recurrent neural networks (RNN)
Deep Learning (Part 3) - Convolutional neural networks (CNN)
Fine tune large protein model (ProtTrans) using HuggingFace
Image classification in Galaxy with fruit 360 dataset
Interval-Wise Testing for omics data
Introduction to Machine Learning using R
Introduction to deep learning
Machine learning: classification and regression
PAPAA PI3K_OG: PanCancer Aberrant Pathway Activity Analysis
Regression in Machine Learning
Supervised Learning with Hyperdimensional Computing
Text-mining with the SimText toolset

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

Follow topic updates rss-feed with our RSS Feed

Editorial Board

This material is reviewed by our Editorial Board:

Marzia A Cremona avatar Marzia A Cremonaorcid logoFabio Cumbo avatar Fabio CumboAnup Kumar avatar Anup Kumar

Contributors

This material was contributed to by:

Dennis Lal group avatar Dennis Lal grouporcid logoBérénice Batut avatar Bérénice Batutorcid logoFotis E. Psomopoulos avatar Fotis E. PsomopoulosVijay avatar Vijayorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoMarie Gramm avatar Marie GrammEkaterina Polkh avatar Ekaterina PolkhSimon Bray avatar Simon BrayAnup Kumar avatar Anup Kumarorcid logoAlireza Khanteymoori avatar Alireza Khanteymooriorcid logoFabio Cumbo avatar Fabio CumboKaivan Kamali avatar Kaivan KamaliMarzia A Cremona avatar Marzia A Cremona

Funding

These individuals or organisations provided funding support for the development of this resource