FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Material

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
fair open data stewardship
Making clinical datasets FAIR
fair open data stewardship
Sequence data submission to ENA
FAIR ENA
FAIR data management solutions
fair dmp data stewardship
FAIR Galaxy Training Material
fair gtn training
FAIR Bioimage Metadata
fair data management bioimaging
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
fair data management bioimaging
FAIRification of an RNAseq dataset
fair dmp data stewardship

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
ro-crate
Exporting Workflow Run RO-Crates from Galaxy
ro-crate workflows
RO-Crate in Python
ro-crate jupyter-notebook
Best practices for workflows in GitHub repositories
ro-crate jupyter-notebook
Submitting workflows to LifeMonitor
ro-crate

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
fair dmp data stewardship
Metadata
fair dmp data stewardship
Data Registration
fair dmp data stewardship
Access
fair dmp data stewardship
Persistent Identifiers
fair dmp data stewardship

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Data management in Medicinal Chemistry
fair data-management medicinal-chemistry computational-chemistry

Galaxy instances

You can use a public Galaxy instance which has been tested for the availability of the used tools. They are listed along with the tutorials above.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

Follow topic updates with our RSS Feed

Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

For any question related to this topic and the content, you can contact them or visit our Gitter channel.

Contributors

This material was contributed to by:

orcid logoNick Juty avatar Nick JutyLaura Cooper avatar Laura Cooperorcid logoHelena Rasche avatar Helena Rascheorcid logoRobert Andrews avatar Robert Andrewsorcid logoEli Chadwick avatar Eli ChadwickKellie Snow avatar Kellie Snoworcid logoLuca Pireddu avatar Luca Piredduorcid logoNicola Soranzo avatar Nicola SoranzoSandra Ng avatar Sandra Ngorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoPeter Sefton avatar Peter Seftonorcid logoPaul De Geest avatar Paul De Geestorcid logoMunazah Andrabi avatar Munazah Andrabiorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-Serraorcid logoMarco Enrico Piras avatar Marco Enrico PirasTim Beck avatar Tim Beckorcid logoBranka Franicevic avatar Branka Franicevicorcid logoSaskia Lawson-Tovey avatar Saskia Lawson-Toveyorcid logoXenia Perez Sitja avatar Xenia Perez SitjaJulia Jakiela avatar Julia Jakielaorcid logoKrzysztof Poterlowicz avatar Krzysztof PoterlowiczKorneel Hens avatar Korneel Hensorcid logoSimone Leo avatar Simone LeoLaura Cooper avatar Laura Cooperorcid logoKhaled Jum'ah avatar Khaled Jum'ahorcid logoSara Morsy avatar Sara Morsyorcid logoAndrew Mason avatar Andrew MasonSonal Henson avatar Sonal Hensonorcid logoBruno P. Kinoshita avatar Bruno P. Kinoshita

Funders

This material was funded by:

EuroScienceGateway avatar EuroScienceGatewayBeYond-COVID avatar BeYond-COVIDDASH UK avatar DASH UK