FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
Integrating InvenioRDM-compatible Repositories with Galaxy
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
Making clinical datasets FAIR
Sequence data submission to ENA
Uploading Data to Zenodo from Galaxy
FAIR data management solutions
FAIR Galaxy Training Material
FAIR Bioimage Metadata
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
FAIRification of an RNAseq dataset

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
Exporting Workflow Run RO-Crates from Galaxy
RO-Crate in Python
Best practices for workflows in GitHub repositories
Submitting workflows to LifeMonitor

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
Metadata
Data Registration
Access
Persistent Identifiers

DataPLANT ARCs

This set of tutorials will introduce you to DataPLANT ARCs, and all the relevant tools to create your own ARCs

Lesson Slides Hands-on Recordings Input dataset Workflows
DataPLANT ARCs

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
An earth-system RO-Crate
Data management in Medicinal Chemistry

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

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Contributors

This material was contributed to by:

orcid logoTeresa Müller avatar Teresa Müllerorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoHelena Rasche avatar Helena Rascheorcid logoRobert Andrews avatar Robert Andrewsorcid logoPeter Sefton avatar Peter Seftonorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoEli Chadwick avatar Eli Chadwickorcid logoKevin Frey avatar Kevin Freyorcid logoMartin Čech avatar Martin Čechorcid logoBruno P. Kinoshita avatar Bruno P. Kinoshitaorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoXenia Perez Sitja avatar Xenia Perez Sitjaorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoMunazah Andrabi avatar Munazah Andrabiorcid logoSabrina Zander avatar Sabrina Zanderorcid logoSara Morsy avatar Sara Morsyorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoCristina Martins Rodrigues avatar Cristina Martins Rodriguesorcid logoArmin Dadras avatar Armin Dadrasorcid logoStian Soiland-Reyes avatar Stian Soiland-ReyesStella Eggels avatar Stella Eggelsorcid logoDominik Brilhaus avatar Dominik BrilhausLaura Cooper avatar Laura CooperSandra Ng avatar Sandra NgLaura Cooper avatar Laura Cooperorcid logoWendi Bacon avatar Wendi Baconorcid logoYvan Le Bras avatar Yvan Le BrasDavid López avatar David LópezKorneel Hens avatar Korneel Hensorcid logoSimone Leo avatar Simone Leoorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-Serraorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowiczorcid logoAndrew Mason avatar Andrew MasonTim Beck avatar Tim Beckorcid logoEmily Angiolini avatar Emily Angioliniorcid logoLeonid Kostrykin avatar Leonid Kostrykinorcid logoKhaled Jum'ah avatar Khaled Jum'ahSonal Henson avatar Sonal Hensonorcid logoMarco Enrico Piras avatar Marco Enrico Pirasorcid logoGabriela Lopez-Gonzalez avatar Gabriela Lopez-Gonzalezorcid logoJulia Jakiela avatar Julia Jakielaorcid logoBjörn Grüning avatar Björn Grüningorcid logoMartin Kuhl avatar Martin Kuhlorcid logoLuca Pireddu avatar Luca PiredduGareth Price avatar Gareth Priceorcid logoNick Juty avatar Nick JutyKellie Snow avatar Kellie Snoworcid logoSaskia Lawson-Tovey avatar Saskia Lawson-Toveyorcid logoKevin Rue-Albrecht avatar Kevin Rue-AlbrechtMarie Josse avatar Marie Josseorcid logoBranka Franicevic avatar Branka Franicevicorcid logoPaul De Geest avatar Paul De Geest

Funding

These individuals or organisations provided funding support for the development of this resource