FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
Making clinical datasets FAIR
Sequence data submission to ENA
FAIR data management solutions
FAIR Galaxy Training Material
FAIR Bioimage Metadata
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
FAIRification of an RNAseq dataset
Integrating InvenioRDM-compatible Repositories with Galaxy
Uploading Data to Zenodo from Galaxy

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
Exporting Workflow Run RO-Crates from Galaxy
RO-Crate in Python
Best practices for workflows in GitHub repositories
Submitting workflows to LifeMonitor

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
Metadata
Data Registration
Access
Persistent Identifiers

DataPLANT ARCs

This set of tutorials will introduce you to DataPLANT ARCs, and all the relevant tools to create your own ARCs

Lesson Slides Hands-on Recordings Input dataset Workflows
DataPLANT ARCs

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
An earth-system RO-Crate
Data management in Medicinal Chemistry

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

orcid logoBjörn Grüning avatar Björn GrüningSonal Henson avatar Sonal Hensonorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-SerraKorneel Hens avatar Korneel HensLaura Cooper avatar Laura Cooperorcid logoLeonid Kostrykin avatar Leonid Kostrykinorcid logoRobert Andrews avatar Robert AndrewsKellie Snow avatar Kellie Snoworcid logoSabrina Zander avatar Sabrina Zanderorcid logoTeresa Müller avatar Teresa Müllerorcid logoMartin Kuhl avatar Martin KuhlTim Beck avatar Tim Beckorcid logoKhaled Jum'ah avatar Khaled Jum'ahorcid logoDominik Brilhaus avatar Dominik Brilhausorcid logoEmily Angiolini avatar Emily Angioliniorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoArmin Dadras avatar Armin Dadrasorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoSara Morsy avatar Sara MorsyDavid López avatar David Lópezorcid logoWendi Bacon avatar Wendi Baconorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoXenia Perez Sitja avatar Xenia Perez Sitjaorcid logoKevin Rue-Albrecht avatar Kevin Rue-Albrechtorcid logoMartin Čech avatar Martin ČechGareth Price avatar Gareth Priceorcid logoCristina Martins Rodrigues avatar Cristina Martins Rodriguesorcid logoSimone Leo avatar Simone Leoorcid logoMarie Josse avatar Marie Josseorcid logoMunazah Andrabi avatar Munazah Andrabiorcid logoMarco Enrico Piras avatar Marco Enrico Pirasorcid logoHelena Rasche avatar Helena Rascheorcid logoKevin Frey avatar Kevin Freyorcid logoBranka Franicevic avatar Branka Franicevicorcid logoPaul De Geest avatar Paul De Geestorcid logoEli Chadwick avatar Eli Chadwickorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoJulia Jakiela avatar Julia Jakielaorcid logoPeter Sefton avatar Peter Seftonorcid logoSaskia Hiltemann avatar Saskia HiltemannLaura Cooper avatar Laura Cooperorcid logoAndrew Mason avatar Andrew Masonorcid logoGabriela Lopez-Gonzalez avatar Gabriela Lopez-GonzalezSandra Ng avatar Sandra Ngorcid logoSaskia Lawson-Tovey avatar Saskia Lawson-Toveyorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoLuca Pireddu avatar Luca Piredduorcid logoBruno P. Kinoshita avatar Bruno P. KinoshitaStella Eggels avatar Stella Eggelsorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowiczorcid logoNick Juty avatar Nick Juty

Funding

These individuals or organisations provided funding support for the development of this resource