Variant Analysis — Community Home
This is a new, experimental "Community Home" for a given topic. It is intended to highlight community contributions over the years to a topic!2025 Year in Review
So many new additions to our community!
2
Events
1
Tutorials
1
Recordings
1
Workflows
2
Contributors
Events
Tutorials
Recordings
Workflows
Contributors
2024 Year in Review
So many new additions to our community!
2
Events
2
Tutorials
2
Recordings
1
Contributors
Events
- Workshop on high-throughput sequencing data analysis with Galaxy
- Workshop on high-throughput sequencing data analysis with Galaxy
Tutorials
- Working with Beacon V2: A Comprehensive Guide to Creating, Uploading, and Searching for Variants with Beacons
- Querying the University of Bradford GDC Beacon Database for Copy Number Variants (CNVs)
Recordings
- Recording of Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
- Recording of M. tuberculosis Variant Analysis
Contributors
2023 Year in Review
So many new additions to our community!
1
Tutorials
2
Recordings
1
Workflows
3
Grants
2022 Year in Review
So many new additions to our community!
3
Tutorials
3
Faqs
2
Workflows
4
Contributors
Tutorials
- Avian influenza viral strain analysis from gene segment sequencing data
- Somatic Variant Discovery from WES Data Using Control-FREEC
- Trio Analysis using Synthetic Datasets from RD-Connect GPAP
Faqs
- TB Variant Report crashes (with an error about KeyError: 'protein')
- Do I have to run the tools in the order of the tutorial?
- My snippy is running for a very long time. Is this normal?
Workflows
Contributors
2021 Year in Review
So many new additions to our community!
1
News
2
Tutorials
4
Recordings
1
Workflows
News
Tutorials
- Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
- Automating Galaxy workflows using the command line
Recordings
- Recording of Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
- Recording of From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
- Recording of M. tuberculosis Variant Analysis
- Recording of Automating Galaxy workflows using the command line
Workflows
2020 Year in Review
So many new additions to our community!
2
Tutorials
4
Workflows
1
Contributors
Tutorials
- M. tuberculosis Variant Analysis
- From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
Workflows
- Identification of somatic and germline variants from tumor and normal sample pairs tutorial
- TB Variant Analysis v1.0
- Simple COVID-19 - PE Variation
- Calling variants in non-diploid systems
Contributors
2019 Year in Review
So many new additions to our community!
1
Tutorials
3
Workflows
4
Contributors
2018 Year in Review
So many new additions to our community!
2
Tutorials
4
Workflows
6
Contributors
2017 Year in Review
So many new additions to our community!
3
Tutorials
1
Organisations
18
Contributors
Tutorials
- Calling very rare variants
- Calling variants in diploid systems
- Calling variants in non-diploid systems
Organisations
Contributors
2016 Year in Review
So many new additions to our community!
1
Tutorials
1
Slides
Cumulative Data as CSV
year,2015,2016,2017,2018,2019,2020,2021,2022,2023,2024,2025 news,0,0,0,0,0,0,1,1,1,1,1 events,0,0,0,0,0,0,0,0,0,2,4 learning-pathways, tutorials,0,1,4,6,7,9,11,14,15,17,18 slides,0,1,1,1,1,1,1,1,1,1,1 recordings,0,0,0,0,0,0,4,4,6,8,9 faqs,0,0,0,0,0,0,0,3,3,3,3 workflows,0,0,0,4,7,11,12,14,15,15,16 grants,0,0,0,0,0,0,0,0,3,3,3 organisations,0,0,1,1,1,1,1,1,1,1,1 contributors,0,0,18,24,28,29,29,33,33,34,36