GMOD

Tutorials from the world of the Generic Model Organism Database (GMOD)

GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.

For any question or discussions related to this topic, or to connect with others in the community, please visit the community chat:

comment   Community Matrix Chat

Material

JBrowse 1

Learn to use JBrowse v1 here.

MAKER

Genome Annotation with MAKER.

InterMine

InterMine is a data warehouse you can query for interesting features and data.

Apollo v2

Apollo is a collaborative, real time genome annotation editor.

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Anthony Bretaudeau

Bérénice Batut

Katherine Cox

Torsten Seemann

Yo Yehudi

Bazante Sanders

Daniela Butano

Alexandre Cormier

Delphine Lariviere

Elizabeth Humphries

Stéphanie Robin

Laura Leroi

Ava Hoffman

Robert Meller

Anna Syme

Natalie Kucher

Erwan Corre

Candace Savonen

Anton Nekrutenko

Frederick Tan

Miaomiao Zhou

Saskia Hiltemann

Helena Rasche

Mateo Boudet

Simon Gladman

Nathan Dunn

Funding

These individuals or organisations provided funding support for the development of this resource

ELIXIR Europe

IFB

NHGRI GDS Community Network

NHGRI ANVIL

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

ABRomics

Avans

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.