These workflows are associated with How to reproduce published Galaxy analyses

To use these workflows in Galaxy you can either click the links to download the workflows, or you can right-click and copy the link to the workflow which can be used in the Galaxy form to import workflows.

GTN Training: Galaxy 101 For Everyone

Last updated Jul 10, 2021

Launch in Tutorial Mode question
License: None Specified, defaults to CC-BY-4.0
Tests: ❌ Results: Not yet automated

flowchart TD
  0["ℹ️ Input Dataset\niris"];
  style 0 stroke:#2c3143,stroke-width:4px;
  1["Convert CSV to tabular"];
  0 -->|output| 1;
  1 -->|tabular| 2;
  2 --> e7b92905-9209-4518-8a40-1baa5bb964fe;
  style e7b92905-9209-4518-8a40-1baa5bb964fe stroke:#2c3143,stroke-width:4px;
  3["Remove beginning"];
  1 -->|tabular| 3;
  3 -->|out_file1| 4;
  3 -->|out_file1| 5;
  5 --> 37941b93-965f-40b8-a1f0-ef96d6d9bfae;
  style 37941b93-965f-40b8-a1f0-ef96d6d9bfae stroke:#2c3143,stroke-width:4px;
  3 -->|out_file1| 6;
  6 --> 69373f7c-d986-42ef-a8b8-336215760197;
  style 69373f7c-d986-42ef-a8b8-336215760197 stroke:#2c3143,stroke-width:4px;
  7["Scatterplot w ggplot2"];
  3 -->|out_file1| 7;
  8["Scatterplot w ggplot2"];
  3 -->|out_file1| 8;
  4 -->|out_file1| 9;
  9 --> ec39c0ad-eb26-47d6-b9a7-c2e5ffa043c6;
  style ec39c0ad-eb26-47d6-b9a7-c2e5ffa043c6 stroke:#2c3143,stroke-width:4px;

Importing into Galaxy

Below are the instructions for importing these workflows directly into your Galaxy server of choice to start using them!
Hands-on: Importing a workflow
  • Click on Workflow on the top menu bar of Galaxy. You will see a list of all your workflows.
  • Click on galaxy-upload Import at the top-right of the screen
  • Provide your workflow
    • Option 1: Paste the URL of the workflow into the box labelled “Archived Workflow URL”
    • Option 2: Upload the workflow file in the box labelled “Archived Workflow File”
  • Click the Import workflow button

Below is a short video demonstrating how to import a workflow from GitHub using this procedure: