The University of Melbourne
Members
These GTN contributors have noted that they are affiliated in some way with this organisation. This list is non-exhaustive, and randomly ordered.
Contributions
The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
Tutorials
- Variant Analysis / M. tuberculosis Variant Analysis π΅
- Variant Analysis / Microbial Variant Calling π΅
- Genome Annotation / Identification of AMR genes in an assembled bacterial genome π΅
- Genome Annotation / Genome annotation with Prokka π΅
- Assembly / Large genome assembly and polishing π΅
- Assembly / Unicycler Assembly π΅
- Assembly / Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data) π΅
- Assembly / Chloroplast genome assembly π΅
- Assembly / Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data π΅
- Assembly / An Introduction to Genome Assembly π΅
- Assembly / Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step π΅
- Assembly / De Bruijn Graph Assembly π΅
- Assembly / Hybrid genome assembly - Nanopore and Illumina π΅
- Using Galaxy and Managing your Data / Downloading and Deleting Data in Galaxy π΅
- Introduction to Galaxy Analyses / Best Practices for Citing Galaxy π΅
- Introduction to Galaxy Analyses / A short introduction to Galaxy π΅
- Microbiome / Taxonomic Profiling and Visualization of Metagenomic Data π΅
- Microbiome / 16S Microbial Analysis with mothur (short) π΅
- Microbiome / 16S Microbial Analysis with mothur (extended) π΅
- Galaxy Server administration / Reference Data with Data Managers π΅
- Galaxy Server administration / Reference Data with CVMFS without Ansible π΅
- Galaxy Server administration / Reference Data with CVMFS π΅
- Galaxy Server administration / Running Jobs on Remote Resources with Pulsar π΅
- Galaxy Server administration / Galaxy Monitoring with Reports π΅
- Galaxy Server administration / Mapping Jobs to Destinations using TPV π΅
- Galaxy Server administration / Upgrading Galaxy π΅
- Galaxy Server administration / Galaxy Installation with Ansible π΅
- Galaxy Server administration / Galaxy Interactive Tools π΅
- Ecology / Checking expected species and contamination in bacterial isolate π΅
- Sequence analysis / Mapping π΅
- Sequence analysis / Quality and contamination control in bacterial isolate using Illumina MiSeq Data π΅
- FAIR Data, Workflows, and Research / Uploading Data to Zenodo from Galaxy π΅
- FAIR Data, Workflows, and Research / Integrating InvenioRDM-compatible Repositories with Galaxy π΅
- Epigenetics / Hi-C analysis of Drosophila melanogaster cells using HiCExplorer π΅
- Epigenetics / ATAC-Seq data analysis π΅
- Epigenetics / Formation of the Super-Structures on the Inactive X π΅
- Introduction to Galaxy Analyses / Breve introducciΓ³n a Galaxy - en espaΓ±ol π΅