Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoAnthony Bretaudeau avatar Anthony BretaudeauMirela Minkova avatar Mirela Minkovaorcid logoAnna Syme avatar Anna SymeMélanie Petera avatar Mélanie PeteraJoachim Wolff avatar Joachim Wolfforcid logoDave Clements avatar Dave Clementsorcid logoWendi Bacon avatar Wendi Baconorcid logoDaniela Schneider avatar Daniela SchneiderWilliam Durand avatar William Durandorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoTristan Reynolds avatar Tristan ReynoldsYongbin Li avatar Yongbin LiMatthias Bernt avatar Matthias Berntorcid logoMaria Doyle avatar Maria Doyleorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoArmin Dadras avatar Armin Dadrasorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoFlorian Heyl avatar Florian Heylorcid logoMorgan Howells avatar Morgan Howellsorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoRenato Alves avatar Renato AlvesMehmet Tekman avatar Mehmet TekmanAlaa Elghamry avatar Alaa Elghamryorcid logoAnup Kumar avatar Anup Kumarorcid logoJohn Davis avatar John Davisorcid logoPhil Reed avatar Phil Reedorcid logoAlex Ostrovsky avatar Alex OstrovskyScott Cain avatar Scott CainDilmurat Yusuf avatar Dilmurat YusufDonny Vrins avatar Donny VrinsCyril Monjeaud avatar Cyril MonjeaudOlha Nahorna avatar Olha Nahornaorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoBérénice Batut avatar Bérénice BatutChristopher Barnett avatar Christopher Barnettorcid logoHelena Rasche avatar Helena RascheNiall Beard avatar Niall BeardAndrea Bagnacani avatar Andrea Bagnacaniorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoSarah Peter avatar Sarah Peterorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoLucille Delisle avatar Lucille Delisleorcid logoMartin Čech avatar Martin Čechorcid logoNadia Goué avatar Nadia GouéAnton Nekrutenko avatar Anton Nekrutenkoorcid logoMelanie Föll avatar Melanie FöllMarius van den Beek avatar Marius van den Beekorcid logoTeresa Müller avatar Teresa Müllerorcid logoMarisa Loach avatar Marisa LoachMichele Maroni avatar Michele Maroniorcid logoBjörn Grüning avatar Björn GrüningGildas Le Corguillé avatar Gildas Le CorguilléDavid López avatar David Lópezorcid logoCristóbal Gallardo avatar Cristóbal GallardoAnne Pajon avatar Anne Pajonorcid logoNate Coraor avatar Nate Coraororcid logoDeepti Varshney avatar Deepti VarshneyGareth Price avatar Gareth Priceorcid logoClemens Blank avatar Clemens Blankorcid logoRand Zoabi avatar Rand ZoabiSebastian Schaaf avatar Sebastian SchaafGoodnews Sandy avatar Goodnews Sandyorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoYvan Le Bras avatar Yvan Le Bras

Funding

These individuals or organisations provided funding support for the development of this resource