Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

Niall Beard avatar Niall Beardorcid logoDave Clements avatar Dave Clementsorcid logoBjörn Grüning avatar Björn Grüningorcid logoWendi Bacon avatar Wendi BaconAlaa Elghamry avatar Alaa Elghamryorcid logoLucille Delisle avatar Lucille DelisleJoachim Wolff avatar Joachim Wolfforcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoNate Coraor avatar Nate CoraorGareth Price avatar Gareth PriceSarah Peter avatar Sarah PeterAnne Pajon avatar Anne Pajonorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoMarisa Loach avatar Marisa Loachorcid logoRenato Alves avatar Renato Alvesorcid logoPeter van Heusden avatar Peter van HeusdenMehmet Tekman avatar Mehmet TekmanScott Cain avatar Scott CainDonny Vrins avatar Donny VrinsMélanie Petera avatar Mélanie PeteraGoodnews Sandy avatar Goodnews SandyMarius van den Beek avatar Marius van den BeekAndrea Bagnacani avatar Andrea Bagnacaniorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoMelanie Föll avatar Melanie Föllorcid logoArmin Dadras avatar Armin Dadrasorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoBérénice Batut avatar Bérénice BatutSebastian Schaaf avatar Sebastian Schaaforcid logoYvan Le Bras avatar Yvan Le Brasorcid logoJohn Davis avatar John Davisorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoMorgan Howells avatar Morgan Howellsorcid logoCristóbal Gallardo avatar Cristóbal GallardoMirela Minkova avatar Mirela Minkovaorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoPhil Reed avatar Phil Reedorcid logoMartin Čech avatar Martin ČechOlha Nahorna avatar Olha NahornaMatthias Bernt avatar Matthias Berntorcid logoHelena Rasche avatar Helena Rascheorcid logoTeresa Müller avatar Teresa Müllerorcid logoSaskia Hiltemann avatar Saskia HiltemannDavid López avatar David Lópezorcid logoAnthony Bretaudeau avatar Anthony BretaudeauMichele Maroni avatar Michele Maroniorcid logoFlorian Heyl avatar Florian Heylorcid logoClemens Blank avatar Clemens Blankorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoDaniel Blankenberg avatar Daniel BlankenbergGildas Le Corguillé avatar Gildas Le CorguilléYongbin Li avatar Yongbin Liorcid logoAnna Syme avatar Anna SymeWilliam Durand avatar William Durandorcid logoMaria Doyle avatar Maria Doyleorcid logoDaniela Schneider avatar Daniela SchneiderCyril Monjeaud avatar Cyril MonjeaudDilmurat Yusuf avatar Dilmurat Yusuforcid logoNadia Goué avatar Nadia GouéAnton Nekrutenko avatar Anton NekrutenkoChristopher Barnett avatar Christopher Barnett

Funding

These individuals or organisations provided funding support for the development of this resource