What other methods are available to study the functional state of the microbiome within Galaxy?

Other software such as EggNOG Mapper, MEGAN5, MetaGOmics, MetaProteomeAnalyzer (MPA) and ProPHAnE also generate functional outputs.

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{% snippet  topics/proteomics/tutorials/metaproteomics/faqs/studying_microbiome_state.md %}
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