Phylogenetics - Back to Basics - Phylogenetic Networks
Contributors
#About these slides
The following phylogenetic networks of Anolis species were generated in SplitsTree. They represent selected screenshots of networks explored as a live demo in the video associated with these slides.
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#Uncorrected P model
Phylogenetic network of Anolis species created in SplitsTree using the uncorrected P model.
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#Exploring splits
Click on the branches of the network to explore different splits. Here A. ahli appears in two different splits highlighted in yellow.
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#Let’s follow a split
This is the network made using the uncorrected p model. We will follow the split containing A. lineatopus and A. limifrons through different models.
#Jukes Cantor Model
These networks were created using the Jukes Cantor model. Note that the species A. limifrons appears in two alternate splits.
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#HKY85 Model
This network was created with the HKY85 model. Note that A. limfrons is paired with A. humilis in this split.
#Bootstrapped network
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#Bootstrapped network - a closer look
Let’s explore our two splits again
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#Bootstrapped network - a closer look
This the centre of our bootstrapped network. Note that the values are smaller.