| find-test-data | mold | reviewed | 2026-10-16 | 8 |
| Galaxy: collection patterns | pattern | draft | 2026-10-15 | 4 |
| Galaxy: conditionals patterns | pattern | draft | 2026-10-15 | 4 |
| Galaxy: tabular patterns | pattern | draft | 2026-10-15 | 4 |
| CWL → GALAXY | pipeline | draft | 2026-10-15 | 5 |
| PAPER → GALAXY | pipeline | draft | 2026-10-15 | 6 |
| Galaxy workflow test-data refs | schema | draft | 2026-10-15 | 1 |
| Tabular: split into collection by key | pattern | draft | 2026-10-07 | 4 |
| Tabular: synthesize BED from 3-column input | pattern | draft | 2026-10-04 | 3 |
| Tabular: split taxonomy string | pattern | draft | 2026-10-01 | 3 |
| Tabular: SQL query | pattern | draft | 2026-10-01 | 3 |
| Tabular: concatenate collection to table | pattern | draft | 2026-09-30 | 3 |
| Tabular: pivot collection to wide | pattern | draft | 2026-09-30 | 3 |
| Tabular: prepend header | pattern | draft | 2026-09-30 | 3 |
| Tabular: relabel by row counter | pattern | draft | 2026-09-30 | 3 |
| Tabular: group and aggregate | pattern | draft | 2026-09-29 | 3 |
| Tabular: compute a new column | pattern | draft | 2026-09-28 | 5 |
| Tabular: join on key | pattern | draft | 2026-09-28 | 3 |
| Iwc Tabular Operations Survey | research | draft | 2026-09-28 | 3 |
| Galaxy Apply Rules DSL | research | draft | 2026-09-26 | 3 |
| Galaxy collection-operation tools | research | draft | 2026-09-26 | 3 |
| Galaxy native workflow (.ga) structural JSON Schema | research | draft | 2026-09-26 | 2 |
| Galaxy tool and job failure reference | research | draft | 2026-09-26 | 3 |
| Galaxy workflow invocation failure reference | research | draft | 2026-09-26 | 3 |
| gxformat2 workflow inputs | research | draft | 2026-09-26 | 4 |
| Iwc Conditionals Survey | research | draft | 2026-09-26 | 3 |
| Iwc Parameter Derivation Survey | research | draft | 2026-09-26 | 2 |
| changeset-to-galaxy-test-plan | mold | reviewed | 2026-09-23 | 4 |
| Galaxy: genomic interval patterns | pattern | draft | 2026-09-23 | 4 |
| Galaxy: sequence patterns | pattern | draft | 2026-09-23 | 4 |
| Galaxy data-flow draft contract | research | draft | 2026-09-23 | 4 |
| Galaxy Workflow Comments | research | draft | 2026-09-23 | 3 |
| Galaxy workflow draft format | research | draft | 2026-09-23 | 4 |
| Galaxy Workflow Testability Design | research | draft | 2026-09-23 | 3 |
| gxformat2 structural JSON Schema | research | draft | 2026-09-23 | 3 |
| Iwc Comments Survey | research | draft | 2026-09-23 | 3 |
| Iwc Shortcuts Anti Patterns | research | draft | 2026-09-23 | 3 |
| Iwc Test Data Conventions | research | draft | 2026-09-23 | 4 |
| Planemo Asserts Idioms | research | draft | 2026-09-23 | 7 |
| Galaxy workflow draft (gxformat2 superset) | schema | draft | 2026-09-23 | 4 |
| Galaxy workflow test plan | schema | draft | 2026-09-23 | 3 |
| Galaxy workflow test format | schema | draft | 2026-09-23 | 6 |
| compare-against-iwc-exemplar | mold | reviewed | 2026-09-22 | 12 |
| implement-galaxy-workflow-test | mold | reviewed | 2026-09-22 | 10 |
| repair-galaxy-draft-topology | mold | draft | 2026-09-22 | 5 |
| GALAXY WORKFLOW MATURATION | pipeline | draft | 2026-09-22 | 2 |
| INTERVIEW → GALAXY | pipeline | reviewed | 2026-09-22 | 5 |
| NEXTFLOW → GALAXY | pipeline | reviewed | 2026-09-22 | 5 |
| UPDATE-INTERVIEW → GALAXY | pipeline | reviewed | 2026-09-22 | 3 |
| WORKFLOW BRIEF → GALAXY | pipeline | draft | 2026-09-22 | 5 |
| Open-requirements ledger | research | draft | 2026-09-21 | 4 |
| workflow-brief-to-galaxy-data-flow | mold | draft | 2026-09-20 | 4 |
| workflow-brief-to-galaxy-interface | mold | draft | 2026-09-20 | 4 |
| workflow-brief-to-galaxy-template | mold | draft | 2026-09-20 | 7 |
| workflow-brief-to-galaxy-test-plan | mold | draft | 2026-09-20 | 3 |
| advance-galaxy-draft-step | mold | reviewed | 2026-09-17 | 7 |
| convert-nfcore-module-to-galaxy-tool | mold | draft | 2026-09-16 | 11 |
| Collection: split identifier via rules | pattern | draft | 2026-09-15 | 3 |
| Collection: harmonize by sortlist from identifiers | pattern | draft | 2026-09-15 | 3 |
| Collection: sync collections by identifier | pattern | draft | 2026-09-15 | 3 |
| Tabular: filter rows by regex | pattern | draft | 2026-09-15 | 3 |
| Galaxy datatypes registry sample | research | draft | 2026-09-15 | 3 |
| Galaxy <discover_datasets> | research | draft | 2026-09-15 | 3 |
| Collection: build named bundle | pattern | draft | 2026-09-14 | 3 |
| Conditional: route between alternative outputs | pattern | draft | 2026-09-14 | 4 |
| Tabular: cut and reorder columns | pattern | draft | 2026-09-14 | 3 |
| Collection: flatten after fan-out | pattern | draft | 2026-09-13 | 3 |
| Collection: swap nesting with Apply Rules | pattern | draft | 2026-09-13 | 3 |
| Collection: unbox singleton | pattern | draft | 2026-09-13 | 3 |
| Tabular: filter rows by column value | pattern | draft | 2026-09-13 | 3 |
| run-workflow-test | mold | reviewed | 2026-09-12 | 7 |
| validate-galaxy-workflow | mold | reviewed | 2026-09-12 | 5 |
| IWC workflow pull request review command | prompt | draft | 2026-09-12 | 3 |
| mature-galaxy-workflow-for-iwc | mold | draft | 2026-09-10 | 1 |
| IWC Copilot workflow review instructions | prompt | draft | 2026-09-09 | 1 |
| nextflow-summary-to-galaxy-data-flow | mold | reviewed | 2026-08-29 | 7 |
| author-galaxy-tool-wrapper | mold | reviewed | 2026-08-24 | 5 |
| Galaxy custom tool container critic | prompt | draft | 2026-08-24 | 1 |
| Galaxy custom tool critic | prompt | draft | 2026-08-24 | 2 |
| Galaxy custom tool structured generator | prompt | draft | 2026-08-24 | 2 |
| Galaxy user-defined tool authoring rules | research | draft | 2026-08-24 | 1 |
| Galaxy user-defined tool critique criteria | research | draft | 2026-08-24 | 1 |
| apply-galaxy-workflow-changeset | mold | reviewed | 2026-08-19 | 3 |
| cwl-summary-to-galaxy-data-flow | mold | draft | 2026-08-19 | 3 |
| cwl-summary-to-galaxy-interface | mold | draft | 2026-08-19 | 3 |
| cwl-summary-to-galaxy-template | mold | draft | 2026-08-19 | 5 |
| freeform-summary-to-galaxy-data-flow | mold | reviewed | 2026-08-19 | 3 |
| freeform-summary-to-galaxy-interface | mold | reviewed | 2026-08-19 | 3 |
| freeform-summary-to-galaxy-template | mold | reviewed | 2026-08-19 | 6 |
| implement-galaxy-tool-step | mold | reviewed | 2026-08-19 | 9 |
| interview-to-galaxy-workflow-changeset | mold | reviewed | 2026-08-19 | 3 |
| nextflow-summary-to-galaxy-interface | mold | reviewed | 2026-08-19 | 6 |
| nextflow-summary-to-galaxy-reference-data | mold | reviewed | 2026-08-19 | 5 |
| nextflow-summary-to-galaxy-template | mold | reviewed | 2026-08-19 | 9 |
| debug-galaxy-workflow-output | mold | reviewed | 2026-07-24 | 5 |
| discover-shed-tool | mold | reviewed | 2026-07-24 | 5 |
| freeform-summary-to-galaxy-test-plan | mold | reviewed | 2026-07-24 | 2 |
| summarize-galaxy-tool | mold | reviewed | 2026-07-24 | 8 |
| Planemo test report (JSON) | schema | draft | 2026-07-20 | 3 |
| Interval: consensus regions by multi-intersect | pattern | draft | 2026-06-10 | 1 |
| Interval: compute coverage | pattern | draft | 2026-06-10 | 1 |
| Interval: build a mask by set algebra | pattern | draft | 2026-06-10 | 1 |
| Interval: merge overlapping features | pattern | draft | 2026-06-10 | 1 |
| Interval: filter or annotate by overlap | pattern | draft | 2026-06-10 | 1 |
| Interval: window or flank features | pattern | draft | 2026-06-10 | 1 |
| Interval: windowed coverage around features | pattern | draft | 2026-06-10 | 1 |
| Sequence: relabel FASTA headers via tabular | pattern | draft | 2026-06-10 | 1 |
| Sequence: compute record lengths | pattern | draft | 2026-06-10 | 1 |
| Sequence: extract or mask by region | pattern | draft | 2026-06-10 | 1 |
| Sequence: interconvert FASTA and tabular | pattern | draft | 2026-06-10 | 1 |
| Sequence: merge FASTA and filter unique | pattern | draft | 2026-06-10 | 1 |
| Sequence: reformat FASTA line width | pattern | draft | 2026-06-10 | 1 |
| Iwc Interval Operations Survey | research | draft | 2026-06-10 | 1 |
| Iwc Sequence Operations Survey | research | draft | 2026-06-10 | 1 |
| nf-core channel input → Galaxy data / collection | research | draft | 2026-06-10 | 3 |
| nf-core meta-map → Galaxy params | research | draft | 2026-06-10 | 3 |
| nf-core stub: block → Galaxy (intentional drop) | research | draft | 2026-06-10 | 3 |
| nf-core task.ext.args → Galaxy additional-options bag | research | draft | 2026-06-10 | 3 |
| nf-core versions emit → Galaxy <version_command> | research | draft | 2026-06-10 | 3 |
| CWL pickValue → Galaxy pick_value (post galaxy#22222) | research | draft | 2026-05-11 | 1 |
| CWL when:/pickValue → Galaxy branching translation | research | draft | 2026-05-11 | 1 |
| Galaxy paired_or_unpaired collection type | research | draft | 2026-05-11 | 1 |
| Planemo workflow-test architecture | research | draft | 2026-05-11 | 3 |
| Nextflow to Galaxy reference-data mapping | research | draft | 2026-05-10 | 5 |
| Nextflow conditional to Galaxy subworkflow / when | research | draft | 2026-05-08 | 1 |
| Nextflow params to Galaxy workflow inputs | research | draft | 2026-05-08 | 4 |
| Galaxy sample_sheet collection types | research | draft | 2026-05-06 | 2 |
| Nextflow path/glob to Galaxy datatype mapping | research | draft | 2026-05-06 | 1 |
| Nextflow-to-Galaxy channel shape mapping | research | draft | 2026-05-06 | 2 |
| nf-schema sample sheet validation gaps in Galaxy | research | draft | 2026-05-06 | 1 |
| Component Nextflow Containers And Envs | research | draft | 2026-05-05 | 3 |
| Galaxy collection semantics | research | draft | 2026-05-05 | 3 |
| Galaxy tool XML schema | research | draft | 2026-05-05 | 1 |
| Nextflow nf-test snapshots to Galaxy/Planemo assertions | research | draft | 2026-05-05 | 2 |
| Galaxy tool summary manifest | schema | draft | 2026-05-05 | 1 |
| Galaxy ParsedTool | schema | draft | 2026-05-05 | 1 |
| Cleanup, sync, and publish non-empty results | pattern | draft | 2026-05-04 | 1 |
| Fan-in bundle, consume, and flatten | pattern | draft | 2026-05-04 | 1 |
| Manifest to mapped collection lifecycle | pattern | draft | 2026-05-04 | 1 |
| Reshape, relabel, and remap by collection axis | pattern | draft | 2026-05-04 | 1 |
| Iwc Runtime Parameter Shims Survey | research | draft | 2026-05-04 | 1 |
| Galaxy tool discovery recommendation | schema | draft | 2026-05-04 | 1 |
| Nextflow: branch, filter, and ifEmpty to Galaxy filters and gates | source-pattern | draft | 2026-05-04 | 1 |
| Nextflow: grouped channel to regrouped Galaxy collection | source-pattern | draft | 2026-05-04 | 1 |
| Nextflow: keyed join/combine(by:) to identifier-synchronized map-over | source-pattern | draft | 2026-05-04 | 1 |
| Nextflow: mapped output cleanup and publishing | source-pattern | draft | 2026-05-04 | 1 |
| Nextflow: mix and collect to report aggregation | source-pattern | draft | 2026-05-04 | 1 |
| Nextflow: samplesheet rows to Galaxy collections | source-pattern | draft | 2026-05-04 | 1 |
| Collection: build list paired with Apply Rules | pattern | draft | 2026-05-03 | 2 |
| Collection: cleanup after map-over failure | pattern | draft | 2026-05-03 | 2 |
| Parameter: compose runtime text parameter | pattern | draft | 2026-05-03 | 3 |
| Conditional: gate on non-empty result | pattern | draft | 2026-05-03 | 3 |
| Conditional: run optional step | pattern | draft | 2026-05-03 | 4 |
| Conditional: transform or pass through | pattern | draft | 2026-05-03 | 2 |
| Parameter: derive from file | pattern | draft | 2026-05-03 | 3 |
| Parameter: map workflow enum to tool parameter | pattern | draft | 2026-05-03 | 3 |
| Collection: regex relabel via tabular | pattern | draft | 2026-05-03 | 2 |
| Collection: relabel via rules and find/replace | pattern | draft | 2026-05-03 | 2 |
| Component Tool Shed Search | research | draft | 2026-05-03 | 2 |
| Galaxy tool summary input source | research | draft | 2026-05-03 | 2 |
| Iwc Map Over Lifecycle Survey | research | draft | 2026-05-03 | 1 |
| Iwc Workflow Testability Survey | research | draft | 2026-05-03 | 2 |
| Nextflow: source pattern map | source-pattern | draft | 2026-05-03 | 1 |
| Iwc Transformations Survey | research | draft | 2026-05-02 | 2 |
| Nextflow operators to Galaxy collection recipes | research | draft | 2026-05-02 | 1 |