summarize-paper

Extract methods, tools, sample data, and references from a paper.

draft source/paper

Mold health

warn

Source layout
Every file beside index.md is one the mold kind declares.
Axis fields
source-specific fields are coherent.
Eval plan
Abstract oracle: the properties any cast of this Mold must satisfy.

eval.md not written yet.
Scenarios
Concrete cases bound to fixtures, run against the eval properties.

scenarios.md not written yet.
Typed refs
No typed references yet.
On-demand triggers
All on-demand references describe triggers.
Evidence checks
Hypothesis references include verification.

axis: source-specific
source: paper
name: summarize-paper

Cast artifacts

Claude skill summarize-paper — Extract methods, tools, sample data, and references from a paper.

How to install →

Artifact handoffs

/ pipeline contract

Produces

freeform-summary markdown freeform-summary.md

Methods, tools, sample data, references, and workflow intent extracted from a primary paper, normalized into the shared free-form source summary handoff.
consumed by

summarize-paper

Read a methods/tool paper and emit a free-form Markdown summary capturing the workflow’s steps, tools, parameters, and sample/reference-data leads.

Emit the same freeform-summary artifact shape used by interview-derived sources so downstream freeform-summary Molds can operate on paper and interview starts without splitting the design/template tier.

Incoming References (3)

PAPER → CWL phase of pipeline — Direct path from a paper to a CWL Workflow + CommandLineTool set.
PAPER → GALAXY phase of pipeline — Direct path from a paper to a Galaxy gxformat2 workflow. No CWL intermediate.
Alignment: gxy-sketches ↔ Galaxy Workflow Foundry related mold — Where the Foundry's per-source summary Molds align with gxy-sketches on field names and source/test-fixture vocabulary, and where they intentionally do not.