artifact
freeform-summary
default filename(s): freeform-summary.md
Producers (2)
- interview-to-freeform-summary markdown · freeform-summary.md
Methods, tools, sample data, references, constraints, open questions, and workflow intent gathered from a user interview.
- summarize-paper markdown · freeform-summary.md
Methods, tools, sample data, references, and workflow intent extracted from a primary paper, normalized into the shared free-form source summary handoff.
Consumers (12)
- find-test-data
Source summary from [[summarize-paper]] / [[interview-to-freeform-summary]]; mine its sample-data, public-data-candidate, accession, and data-sizing guidance — this is where the source's dataset evidence lives (the design briefs strip it).
- freeform-summary-to-cwl-design
Free-form source summary emitted by [[summarize-paper]] or [[interview-to-freeform-summary]]; methods, tools, sample data, references, and workflow intent.
- freeform-summary-to-galaxy-data-flow
Free-form source summary emitted by [[summarize-paper]] or [[interview-to-freeform-summary]]; consumed alongside the Galaxy interface brief.
- freeform-summary-to-galaxy-interface
Free-form source summary emitted by [[summarize-paper]] or [[interview-to-freeform-summary]]; methods, tools, sample data, references, and workflow intent with explicit uncertainty.
- freeform-summary-to-galaxy-template
Free-form source summary emitted by [[summarize-paper]] or [[interview-to-freeform-summary]]; consulted while emitting placeholder steps.
- freeform-summary-to-galaxy-test-plan
Free-form source summary from [[summarize-paper]] or [[interview-to-freeform-summary]]; carries methods, sample data, parameters, and expected outputs that seed test intent.
- freeform-summary-to-workflow-brief
Source evidence supplied by the preceding summarizer; preserve uncertainty and the caller’s selected scope.
- paper-to-test-data
Free-form summary from [[summarize-paper]]; sample data and reference evidence the test fixtures derive from.
- workflow-brief-to-galaxy-data-flow
Optional narrative source evidence retained from brief production; consult it for details within the selected scope.
- workflow-brief-to-galaxy-interface
Optional narrative source evidence; it may clarify the selected scope but cannot broaden or override the brief.
- workflow-brief-to-galaxy-template
Optional narrative source evidence retained from brief production; consult it for source-backed detail within the selected scope.
- workflow-brief-to-galaxy-test-plan
Optional narrative source evidence carrying methods, sample data, parameters, and expected outputs within the brief's selected scope.
Pipelines
- CWL → GALAXY consumed @ phase 7
- INTERVIEW → GALAXY produced @ phase 1 · consumed @ phase 2, 3, 5, 7, 8
- INTERVIEW → WORKFLOW BRIEF produced @ phase 1 · consumed @ phase 2
- NEXTFLOW → GALAXY consumed @ phase 8
- PAPER → CWL produced @ phase 1 · consumed @ phase 2, 7
- PAPER → GALAXY produced @ phase 1 · consumed @ phase 2, 3, 5, 7, 8
- PAPER → WORKFLOW BRIEF produced @ phase 1 · consumed @ phase 2
- WORKFLOW BRIEF → GALAXY consumed @ phase 1, 2, 4, 6, 7