Sequence analysis

Analyses of sequences

Requirements

Before diving into this topic, we recommend you to have a look at:

Material

Lesson Slides Hands-on Input dataset Workflows Galaxy tour Galaxy instances
Quality Control
Mapping
Genome Annotation
prokaryote
RAD-Seq Reference-based data analysis
RAD-Seq de-novo data analysis
RAD-Seq to construct genetic maps
Genome annotation with Prokka
prokaryote

Galaxy instances

You can also a public Galaxy instance which has been tested for the availability of the used tools. They are listed along with the tutorials above.

You can also use for these tutorials the dedicated Docker image:

docker run -d -p 8080:80 quay.io/galaxy/sequence-analysis-training

It will launch a flavored Galaxy instance available on http://localhost:8080.

Maintainers

This material is maintained by:

For any question related to this topic and the content, you can contact them.

Contributors

This material was contributed to by:

References