ChIP-Seq data analysis

ChIP-sequencing is a method used to analyze protein interactions with DNA.

Requirements

Before diving into this topic, we recommend you to have a look at:

Material

Lesson Slides Hands-on Input dataset Workflows Galaxy tour Galaxy instances
Introduction to ChIP-Seq data analysis
slides
Formation of the Super-Structures on the Inactive X
slides tutorial zenodo_link workflow interactive_tour

Galaxy instances

You can use a public Galaxy instance which has been tested for the availability of the used tools. They are listed along with the tutorials above.

Maintainers

This material is maintained by:

Mallory FreebergMallory Freeberg, Mo HeydarianMo Heydarian, Friederike DündarFriederike Dündar

For any question related to this topic and the content, you can contact them or visit our Gitter channel.

Contributors

This material was contributed to by:

Bérénice BatutBérénice Batut, Friederike DündarFriederike Dündar, Anika ErxlebenAnika Erxleben, Vivek BhardwajVivek Bhardwaj, Fidel RamirezFidel Ramirez, Leily RabbaniLeily Rabbani, Mallory FreebergMallory Freeberg, Mo HeydarianMo Heydarian, Joachim WolffJoachim Wolff

References