Import workflows from WorkflowHub

Authors: orcid logoCristóbal Gallardo avatar Cristóbal Gallardo orcid logoLinelle Abueg avatar Linelle Abueg Anton Nekrutenko avatar Anton Nekrutenko Add Contributions!

WorkflowHub is a workflow management system which allows workflows to be FAIR (Findable, Accessible, Interoperable, and Reusable), citable, have managed metadata profiles, and be openly available for review and analytics.

  1. Ensure that you are logged in to your Galaxy account.
  2. Click on the Workflow menu, located in the top bar.
  3. Click on the Import button, located in the right corner.
  4. In the section “Import a Workflow from Configured GA4GH Tool Registry Servers (e.g. Dockstore)”, click on Search form.
  5. In the TRS Server: workflowhub.eu menu you should type your query. galaxy TRS workflow search field, name:vgp is entered in the search bar, and five different workflows all labelled VGP are listed
  6. Click on the desired workflow, and finally select the latest available version.

After that, the imported workflows will appear in the main workflow menu. In order to run the workflow, just need to click in the Run workflow icon.

Below is a short video showing this uncomplicated procedure:

Video: Importing from WorkflowHub
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