Translate a free-form source summary into a CWL workflow design brief.
/plugin marketplace add galaxyproject/foundry
/plugin install foundry-skills@galaxy-workflow-foundryThen invoke as:
/foundry-skills:freeform-summary-to-cwl-designcodex plugin marketplace add galaxyproject/foundry
codex plugin add foundry-skills@galaxy-workflow-foundryThen select with /skills or invoke explicitly as:
$freeform-summary-to-cwl-designProduces: 1 artifact.
Consumes: 1 artifact.
Combined CWL interface + data-flow design brief; a single reviewable handoff for free-form sources until examples justify a split.
{
"id": "freeform-cwl-design",
"kind": "markdown",
"default_filename": "freeform-cwl-design.md",
"description": "Combined CWL interface + data-flow design brief; a single reviewable handoff for free-form sources until examples justify a split."
}Free-form source summary emitted by [[summarize-paper]] or [[interview-to-freeform-summary]]; methods, tools, sample data, references, and workflow intent.
{
"id": "freeform-summary",
"description": "Free-form source summary emitted by [[summarize-paper]] or [[interview-to-freeform-summary]]; methods, tools, sample data, references, and workflow intent.",
"producers": [
"interview-to-freeform-summary",
"summarize-paper"
]
}
# freeform-summary-to-cwl-design
Follow the procedure below and use the artifact/reference sections as the runtime contract.
## When To Use
- Translate a free-form source summary into a CWL workflow design brief.
## Inputs
- Read artifact `freeform-summary`. Produced by `interview-to-freeform-summary`, `summarize-paper`. Free-form source summary emitted by summarize-paper or interview-to-freeform-summary; methods, tools, sample data, references, and workflow intent.
## Outputs
- Write artifact `freeform-cwl-design` as `freeform-cwl-design.md`. Format: `markdown`. Combined CWL interface + data-flow design brief; a single reviewable handoff for free-form sources until examples justify a split.
## Required Tools
- None declared. Procedure should not assume external CLIs are present.
## Load Upfront
- None declared.
## Load On Demand
- None declared.
## Validation
- None declared.
## Procedure
Read a free-form source summary and emit a reviewable Markdown CWL workflow design brief. Combine interface choices and abstract data-flow choices until free-form source examples justify a cleaner split.
The output is not a concrete CWL Workflow. summary-to-cwl-template turns this brief and the free-form summary into a skeleton.
## Runtime Notes
- Do not read Foundry source files at runtime; use only files packaged in this skill bundle and user-supplied artifacts.
- Preserve declared artifact filenames unless the user or harness supplies explicit paths.
- Carry unresolved assumptions into the output artifact instead of silently inventing missing source evidence.