Contributing to the Galaxy Training Material

Galaxy is a great solution to train the bioinformatics concepts: numerous bioinformatics tools are available (more than 7,000 in the ToolShed), it can be used by people without any computer science skills, it trains to use technology, outlining available resources and efforts that have made them accessible to researchers, it is scalable.
In 2016, the Galaxy Training Network decided to set up a new infrastructure for delivering easily Galaxy related training material. The idea was to develop something open and online based on a community effort, as always in Galaxy.

Material

Before you start: Designing your lessons

These tutorials will guide you on the pedagogy to create impactful training material

Getting Started with the GTN

These tutorials will get you started with the basics needed to contribute to the GTN. First we will show you how you can build the GTN website on GitPod or locally, and then the basics of creating tutorials and slides.

Advanced GTN Materials writing

Tutorials showing you how to use some advanced GTN features in your training materials.

Contributing through GitHub

How to collaborate with the GTN

Analyses using GTN data

Over the years publications about the GTN and GTN communities have been published, and used GTN (meta)data to do it. These tutorials will show you how to leverage some of the data already contained within the GTN, but beware, they generally require programming skills!

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Bérénice Batut

Björn Grüning

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

Donny Vrins

Bert Droesbeke

Cyril Monjeaud

Anastas Mishev

Pablo Moreno

Simon Bray

Saskia Hiltemann

Björn Grüning

Krzysztof Poterlowicz

Аrnaud Gingold

Armin Dadras

Marie Josse

Patricia Palagi

Achim Winandi

Pavankumar Videm

Niall Beard

Teresa Müller

Linelle Abueg

Vojdan Kjorveziroski

Cristóbal Gallardo

Melissa Burke

Andrea Bagnacani

Irakleitos Souyioultzoglou

Simon Gladman

Bazante Sanders

Phil Reed

Nicola Soranzo

Carolin Leister

Marisa Loach

Lucille Delisle

Anthony Bretaudeau

Wendi Bacon

Nils Mittler

Martin Čech

Julia Jakiela

Gildas Le Corguillé

William Durand

Mehmet Tekman

Marius van den Beek

Allegra Via

Sonja Filiposka

Fotis E. Psomopoulos

Dominique Green

Katarzyna Kamieniecka

Christine Hadrossek

Bérénice Batut

Helena Rasche

Peter van Heusden

Funding

These individuals or organisations provided funding support for the development of this resource

de.KCD

UFR

Skills4SEOSC

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

DASH UK

This Fellowship was funded through the ELIXIR-UK DaSH project as part of the UKRI Innovation Scholars: Data Science Training in Health and Bioscience call (DaSH). (MR/V038966/1). The project aims to embed Research Data Management (RDM) know-how into UK universities and institutes by producing and delivering training in FAIR data stewardship using ELIXIR-UK knowledge and resources.

ELIXIR Europe

de.NBI