Riccardo Massei

Affiliations

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

13 Tutorials

• Imaging / Execute a BiaPy workflow in Galaxy ✍️ 🧐
• Imaging / Where to start with bioimage analysis in Galaxy 📝 🧐
• Imaging / Use Pycytominer in Galaxy for processing high dimensional image-based readouts ✍️ 🧐
• Imaging / Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy ✍️ 🧐
• Imaging / Voronoi segmentation ✍️
• Imaging / Overview of the Galaxy OMERO-suite - Upload images and metadata in OMERO using Galaxy ✍️ 🧐
• Imaging / Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines ✍️ 🧐

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GitHub Activity

github Issues Reported

12 Merged Pull Requests

See all of the github Pull Requests and github Commits by Riccardo Massei.

• Pycytominer training: add contributors and editing
  template-and-tools
  imaging
• Pycytominer training
  imaging
• Training Update: OMERO suite tutorial with new credential system
  imaging
• FIX: cellpose citation in "Where to start with bioimage analysis in Galaxy"
  imaging
• Add funding information to the tutorial
  imaging

Reviewed 7 PRs

We love our community reviewing each other's work!

• Pycytominer training
  imaging
• Training Update: OMERO suite tutorial with new credential system
  imaging
• Add tutorial: Where to start with bioimage analysis in Galaxy
  imaging
• New Tutorial: Execute a BiaPy workflow in Galaxy using a YAML configuration file
  template-and-tools
  imaging
• New Tutorial: Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
  imaging

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